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updated URLs for excercises
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asntech committed Mar 8, 2024
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Expand Up @@ -43,8 +43,8 @@ Learn best practices for organizing, sharing, and documenting code and data to f
| 02.26.2024 | Mon | Introduction to reproducibility and setting up | 10:00-13:00 | M218A | [Slides](/01-course-intro/BIOS259_01-introduction-to-reproducibility_20240226.pdf), Setup instructions |
| 02.28.2024 | Wed | Version Control (Git/GitHub) | 10:00-13:00 | M218A | Slides, [Git cheat sheet](/02-git/git-cheat-sheet.pdf) |
| 03.01.2024 | Fri | Environment management (Conda, Bioconda, Mamba) | 10:00-13:00 | M218A | [Slides](/03-env-conda/BIOS259_03-dependency-management-with-conda-mamba.pdf), [Conda cheat sheet](/03-env-conda/conda-cheatsheet.pdf) |
| 03.04.2024 | Mon | Containerization (Docker, Singularity) | 10:00-13:00 | M218A | [Slides](/04-containers/BIOS259_04-containerization.pdf), [Docker cheat sheet](https://docs.docker.com/get-started/docker_cheatsheet.pdf) |
| 03.06.2024 | Wed | Workflows (Snakemake, Nextflow/nf-core) | 10:00-13:00 | M218A | |
| 03.04.2024 | Mon | Containerization (Docker, Singularity) | 10:00-13:00 | M218A | [Slides](/04-containers/BIOS259_04-containerization.pdf), [Docker cheat sheet](https://docs.docker.com/get-started/docker_cheatsheet.pdf), [Excercise](/04-containers/) |
| 03.06.2024 | Wed | Workflows (Snakemake, Nextflow/nf-core) | 10:00-13:00 | M218A | [Excercise](/05-workflows/ |
| 03.08.2024 | Fri | Document and share (Notebooks, FAIR data, and open code) and wrap-up | 10:00-13:00 | LK208 | [Slides](/06-docs-sharing/BIOS259_06-literate-programming-FAIR-data.pdf), [Excercise](/06-docs-sharing/) |


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