Update ASReview Makita from 0.10.x to 1.0.x #540
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| name: test-suite | |
| on: [push, pull_request] | |
| jobs: | |
| test-template-and-lint: | |
| strategy: | |
| matrix: | |
| os: [windows-latest, ubuntu-latest] | |
| python-version: ['3.8', '3.12'] | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| architecture: 'x64' | |
| - name: Cache Python packages | |
| uses: actions/cache@v4 | |
| with: | |
| path: | | |
| ${{ runner.os == 'Windows' && 'C:\users\runneradmin\appdata\local\pip\cache' || '~/.cache/pip' }} | |
| key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements.txt') }} | |
| restore-keys: | | |
| ${{ runner.os }}-pip- | |
| - name: Install dependencies | |
| run: | | |
| pip install . ruff scitree asreview-datatools asreview-insights synergy-dataset | |
| - name: Lint python with ruff | |
| run: | | |
| ruff check . | |
| - name: Render makita templates | |
| run: | | |
| asreview makita template basic -p basic -d .github/workflows/test_data/ --classifier nb --feature_extractor tfidf --query_strategy max --n_runs 1 --init_seed 1 --model_seed 2 --skip_wordclouds --overwrite --instances_per_query 2 --stop_if min --balance_strategy double | tee output_basic.txt | |
| grep -q "ERROR" output_basic.txt && exit 1 || true | |
| asreview makita template arfi -p arfi -d .github/workflows/test_data/ | tee output_arfi.txt | |
| grep -q "ERROR" output_arfi.txt && exit 1 || true | |
| asreview makita template prior -p prior -d .github/workflows/test_data/ | tee output_prior.txt | |
| grep -q "ERROR" output_prior.txt && exit 1 || true | |
| asreview makita template multimodel -p multimodel -d .github/workflows/test_data/ | tee output_multimodel.txt | |
| grep -q "ERROR" output_multimodel.txt && exit 1 || true | |
| - name: Render makita scripts | |
| run: | | |
| asreview makita add-script --all -o ./tmp/scripts | tee output_scripts.txt | |
| grep -q "ERROR" output_scripts.txt && exit 1 || true | |
| - name: Run SciTree | |
| if: ${{ matrix.os != 'windows-latest' }} | |
| run: | | |
| cd ./tmp/ | |
| scitree | |
| - name: Execute basic template jobs file | |
| if: ${{ matrix.os != 'windows-latest' }} | |
| run: | | |
| mkdir basic_run | |
| cd basic_run | |
| asreview makita template basic -d ../.github/workflows/test_data/ --instances_per_query 100 --skip_wordclouds --overwrite --n_runs 1 | |
| scitree | |
| sh jobs.sh | |
| scitree | |
| - name: Upload output files | |
| if: always() | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: output-files | |
| path: | | |
| output_basic.txt | |
| output_arfi.txt | |
| output_prior.txt | |
| output_multimodel.txt | |
| output_scripts.txt |