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A pipeline for identify strains from metagenomics data

GPL-3.0 license

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Name		Name	Last commit message	Last commit date
Latest commit History 23 Commits
strainpi		strainpi
.gitignore		.gitignore
LICENSE		LICENSE
MANIFEST.in		MANIFEST.in
README.md		README.md
build.sh		build.sh
requirements.txt		requirements.txt
run_strainpi.py		run_strainpi.py
setup.cfg		setup.cfg
setup.py		setup.py

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strainpi (WIP)

Feature

StrainPhlAn
ConStrains
LSA
StrainFinder
SameStr
StrainGE
inStrain

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A pipeline for identify strains from metagenomics data

GPL-3.0 license

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Python 99.8%
Shell 0.2%