Deploy shiny to hiplot platform

benben-miao · Aug 29, 2023 · c023fae · c023fae
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -64,5 +64,9 @@ Imports:
     shiny
 Suggests: 
 	knitr,
-    rmarkdown
+    rmarkdown,
+    bs4Dash,
+    DT,
+    colourpicker,
+    shinyWidgets
 VignetteBuilder: knitr
diff --git a/README.md b/README.md
@@ -5,15 +5,13 @@
 
 ## 1. Introduction
 
-#### 1.1 Meta Information
-
 **TOmicsVis**: TranscriptOmics Visualization.
 
 **Website**: <https://benben-miao.github.io/TOmicsVis/>
 
-#### 1.2 Github and CRAN Install
+#### 1.1 TOmicsVis Shinyapp
 
-**New!!! TOmicsVis Shinyapp:**
+**1.1.1 Local start funcion:**
 
 ``` r
 # Start shiny application.
@@ -27,6 +25,11 @@ alt="TOmicsVis Shinyapp" />
 <figcaption aria-hidden="true">TOmicsVis Shinyapp</figcaption>
 </figure>
 
+**1.1.2 Online cloud platform:**
+<https://shiny.hiplot.cn/tomicsvis-shiny/>
+
+#### 1.2 Github and CRAN Install
+
 [![](https://cranlogs.r-pkg.org/badges/grand-total/TOmicsVis?color=orange)](https://cran.r-project.org/package=TOmicsVis)
 
 **1.2.1 Install required packages from Bioconductor:**
@@ -1072,12 +1075,12 @@ chord_plot(
 ![](man/figures/README-chord_plot-1.png)<!-- -->
 
     #>      rn   cn value1 value2 o1 o2      x1     x2       col
-    #> 1 ACAA2 CT_1  24.50  24.50 15 30 3779.75 394.66 #DAECC0B2
-    #> 2  ACAN CT_1  14.97  14.97 15 29 5349.40 370.16 #694858B2
-    #> 3  ADH1 CT_1   1.54   1.54 15 28  166.82 355.19 #C047A3B2
-    #> 4  AHSG CT_1   0.00   0.00 15 27 1911.99 353.65 #E7934EB2
-    #> 5 ALDH2 CT_1   2.07   2.07 15 26   11.11 353.65 #71EC4AB2
-    #> 6 AP1S3 CT_1   6.62   6.62 15 25  430.19 351.58 #D334EDB2
+    #> 1 ACAA2 CT_1  24.50  24.50 15 30 3779.75 394.66 #89A2E4B2
+    #> 2  ACAN CT_1  14.97  14.97 15 29 5349.40 370.16 #E5B07FB2
+    #> 3  ADH1 CT_1   1.54   1.54 15 28  166.82 355.19 #CB6280B2
+    #> 4  AHSG CT_1   0.00   0.00 15 27 1911.99 353.65 #DEBD62B2
+    #> 5 ALDH2 CT_1   2.07   2.07 15 26   11.11 353.65 #56CCD8B2
+    #> 6 AP1S3 CT_1   6.62   6.62 15 25  430.19 351.58 #6ABA8AB2
 
 Get help using command `?TOmicsVis::chord_plot` or reference page
 <https://benben-miao.github.io/TOmicsVis/reference/chord_plot.html>.

diff --git a/docs/LICENSE-text.html b/docs/LICENSE-text.html
diff --git a/docs/articles/Tutorials.html b/docs/articles/Tutorials.html
diff --git a/docs/articles/Tutorials_files/figure-html/chord_plot-1.png b/docs/articles/Tutorials_files/figure-html/chord_plot-1.png
diff --git a/docs/index.html b/docs/index.html
diff --git a/docs/news/index.html b/docs/news/index.html
diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml
@@ -3,7 +3,7 @@ pkgdown: 2.0.7
 pkgdown_sha: ~
 articles:
   Tutorials: Tutorials.html
-last_built: 2023-08-28T17:05Z
+last_built: 2023-08-29T14:54Z
 urls:
   reference: https://github.com/benben-miao/TOmicsVis/reference
   article: https://github.com/benben-miao/TOmicsVis/articles

diff --git a/docs/reference/chord_plot-1.png b/docs/reference/chord_plot-1.png
diff --git a/docs/reference/chord_plot.html b/docs/reference/chord_plot.html
diff --git a/docs/reference/figures/README-chord_plot-1.png b/docs/reference/figures/README-chord_plot-1.png
diff --git a/docs/reference/gene_cluster_trend-1.png b/docs/reference/gene_cluster_trend-1.png
diff --git a/docs/reference/gene_cluster_trend-2.png b/docs/reference/gene_cluster_trend-2.png
diff --git a/docs/reference/gene_cluster_trend-3.png b/docs/reference/gene_cluster_trend-3.png
diff --git a/docs/reference/gene_rank_plot-1.png b/docs/reference/gene_rank_plot-1.png
diff --git a/docs/reference/gene_rank_plot-2.png b/docs/reference/gene_rank_plot-2.png
diff --git a/docs/reference/go_enrich_net-1.png b/docs/reference/go_enrich_net-1.png
diff --git a/docs/reference/kegg_enrich_net-1.png b/docs/reference/kegg_enrich_net-1.png
diff --git a/docs/reference/kegg_enrich_net-2.png b/docs/reference/kegg_enrich_net-2.png
diff --git a/docs/search.json b/docs/search.json