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small update in the cache ontologies and update in all of them #174

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merged 4 commits into from
Oct 7, 2024
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In the following issue bigbio/quantms#425 it was detected that for some ontologies in the cache accessions are null, then it can interpreted by duckdb as integers. This PR solves that problem by not allowing empty values in the accessions or labels. Also an update of all the ontologies was done.

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github-actions bot commented Oct 7, 2024

Python linting (black) is failing

To keep the code consistent with lots of contributors, we run automated code consistency checks.
To fix this CI test, please run:

  • Install black: pip install black
  • Fix formatting errors in your pipeline: black .
    Once you push these changes the test should pass, and you can hide this comment 👍
    We highly recommend setting up Black in your code editor so that this formatting is done automatically on save. Ask about it on Slack for help!
    Thanks again for your contribution!

@ypriverol ypriverol merged commit 24151ed into main Oct 7, 2024
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2 participants