Add README link (#8) #89

	name: Python Package using Conda

	on:
	push:
	pull_request:

	jobs:
	build-linux:
	runs-on: ubuntu-latest
	strategy:
	max-parallel: 5

	steps:
	- uses: actions/checkout@v2
	- name: Set up Python 3.8
	uses: actions/setup-python@v2
	with:
	python-version: 3.8
	- uses: conda-incubator/setup-miniconda@v2
	with:
	auto-update-conda: true
	python-version: ${{ matrix.python-version }}
	- name: Add conda to system path
	run: \|
	# $CONDA is an environment variable pointing to the root of the miniconda directory
	echo $CONDA/bin >> $GITHUB_PATH
	- name: Install dependencies
	run: \|
	wget -q https://raw.githubusercontent.com/qiime2/environment-files/master/latest/staging/qiime2-latest-py38-linux-conda.yml
	conda env create -q -n test-env --file qiime2-latest-py38-linux-conda.yml
	source activate test-env
	conda install flake8 pytest
	pip install -e . --no-deps
	- name: Lint with flake8
	run: \|
	source activate test-env
	flake8 q2_katharoseq
	- name: Test with pytest
	run: \|
	source activate test-env
	pytest

	lint:
	runs-on: ubuntu-latest
	steps:
	- name: flake8
	uses: actions/setup-python@v2
	with:
	python-version: 3.8
	- name: install dependencies
	run: \|
	python -m pip install --upgrade pip
	- name: Check out repository code
	uses: actions/checkout@v2
	- name: lint
	run: \|
	pip install -q flake8
	flake8 q2_katharoseq

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