use backoffice package in wfs

bioimage-io · Feb 22, 2024 · 07c15b4 · 07c15b4
1 parent d5f4691
commit 07c15b4
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Showing 4 changed files with 9 additions and 13 deletions.
diff --git a/.github/workflows/backup_call.yaml b/.github/workflows/backup_call.yaml
@@ -36,6 +36,5 @@ jobs:
         with:
           python-version: "3.12"
           cache: "pip" # caching pip dependencies
-      - run: pip install -r requirements.txt
-      - run: |
-          python scripts/backup.py
+      - run: pip install .
+      - run: backoffice backup
diff --git a/.github/workflows/publish_call.yaml b/.github/workflows/publish_call.yaml
@@ -44,9 +44,8 @@ jobs:
         with:
           python-version: "3.12"
           cache: "pip" # caching pip dependencies
-      - run: pip install -r requirements.txt
-      - run: |
-          python scripts/publish.py "${{ inputs.resource_id }}" "${{ inputs.stage_nr }}"
+      - run: pip install .
+      - run: backoffice publis "${{ inputs.resource_id }}" "${{ inputs.stage_nr }}"
       # - name: Publish to Zenodo
       #   run: |
       #     python .github/scripts/update_status.py "${{ inputs.resource_path }}" "Publishing to Zenodo" "5"

diff --git a/.github/workflows/stage_call.yaml b/.github/workflows/stage_call.yaml
@@ -43,10 +43,9 @@ jobs:
         with:
           python-version: "3.12"
           cache: "pip" # caching pip dependencies
-      - run: pip install -r requirements.txt
+      - run: pip install -r .
       - id: stage
-        run: |
-          python scripts/stage.py "${{ inputs.resource_id }}" "${{ inputs.package_url }}"
+        run: bakcoffice stage "${{ inputs.resource_id }}" "${{ inputs.package_url }}"
 
   test:
     needs: stage
@@ -90,8 +89,7 @@ jobs:
         with:
           python-version: "3.12"
           cache: "pip" # caching pip dependencies
-      - run: pip install -r requirements.txt
-      - run: |
-          python scripts/conclude.py "${{ inputs.resource_id }}" "${{needs.stage.outputs.version}}"
+      - run: pip install .
+      - run: bakcoffice await-review "${{ inputs.resource_id }}" "${{needs.stage.outputs.version}}"
 
   # TODO: call emailer
diff --git a/.github/workflows/test.yaml b/.github/workflows/test.yaml
@@ -30,7 +30,7 @@ jobs:
         with:
           python-version: "3.12"
           cache: "pip" # caching pip dependencies
-      - run: pip install -r requirements.txt
+      - run: pip install -r .[dev]
       - run: black .
       - run: pyright -p pyproject.toml
       - run: pytest