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16 Open 66 Closed
16 Open 66 Closed
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Issues list

providing primers for trim-alignment provides different output vs explicit column positions for the same primers.
#175 opened Feb 8, 2024 by mikerobeson
1
@mikerobeson @misialq
Update help text for clarity: dereplicate --p-mode super
#165 opened Oct 5, 2023 by mikerobeson
Remove heavy dependencies
#163 opened Sep 28, 2023 by ebolyen
7
orient-seqs: accept FASTQ data as input
#159 opened Jul 13, 2023 by nbokulich
3
Sequence identifier warnings from get-ncbi-data.
#158 opened May 10, 2023 by mikerobeson
@BenKaehler
ENH: action to get preformatted blast databases
#135 opened May 17, 2022 by nbokulich
1
ENH: refactor + parallelize the evaluate-fit-classifier and cross-validate pipelines
#131 opened Mar 23, 2022 by nbokulich
[ENH] trim-alignment: how to deal with gappy primer alignments?
#129 opened Mar 19, 2022 by nbokulich
1
trim-alignment : documentation updates
#128 opened Mar 19, 2022 by nbokulich
2
Migrate transformers, etc... to qiime2/q2-types
#105 opened Apr 9, 2021 by mikerobeson
4
Request for update to Taxon Table
#93 opened Jan 16, 2021 by AlexaBennett
7
feature request for dereplicate
#81 opened Oct 5, 2020 by devonorourke
5
CI/BUG: NCBI API rate limit exceeded
#74 opened Sep 17, 2020 by thermokarst
add option to keep original downloaded silva files and/or different taxonomy files? question Further information is requested
#48 opened Jun 13, 2020 by mikerobeson
6
add pipeline to generate, format, filter SILVA database
#29 opened Jun 3, 2020 by nbokulich
7
add length mode to dereplicate?
#1 opened Apr 29, 2019 by nbokulich
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