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  1. Transitions Transitions Public

    Accompanying code for the paper "Global patterns and rates of habitat transitions across the eukaryotic tree of life" (Jamy et al. 2022) on Nature Ecology and Evolution.

    Shell 3 2

  2. Phylogenomics_Data Phylogenomics_Data Public

    Phylogenomics data and scripts

    Shell 1

  3. scripts scripts Public

    Various scripts used in the Burki Lab

    Python

  4. long-reads long-reads Public

    Data and scripts for "Long metabarcoding of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity" (Jamy et al. 2019). Duplicated from https://github.com/…

    C++

  5. juppmaxyter_tunnel juppmaxyter_tunnel Public

    This small repo helps to tunnel jupyter lab from UPPMAX. Jupyter can then be used for any preferred kernel.

    Shell

  6. Ammonia Ammonia Public

    Internal workshop on git, Github and Jupyter - April 2022

    Jupyter Notebook

Repositories

Showing 6 of 6 repositories
  • Transitions Public

    Accompanying code for the paper "Global patterns and rates of habitat transitions across the eukaryotic tree of life" (Jamy et al. 2022) on Nature Ecology and Evolution.

    burki-lab/Transitions’s past year of commit activity
    Shell 3 MIT 2 0 0 Updated Jun 17, 2022
  • Phylogenomics_Data Public

    Phylogenomics data and scripts

    burki-lab/Phylogenomics_Data’s past year of commit activity
    Shell 1 0 0 0 Updated Jun 1, 2022
  • Ammonia Public

    Internal workshop on git, Github and Jupyter - April 2022

    burki-lab/Ammonia’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Apr 19, 2022
  • scripts Public

    Various scripts used in the Burki Lab

    burki-lab/scripts’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Apr 19, 2022
  • juppmaxyter_tunnel Public

    This small repo helps to tunnel jupyter lab from UPPMAX. Jupyter can then be used for any preferred kernel.

    burki-lab/juppmaxyter_tunnel’s past year of commit activity
    Shell 0 0 0 0 Updated Apr 16, 2022
  • long-reads Public

    Data and scripts for "Long metabarcoding of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity" (Jamy et al. 2019). Duplicated from https://github.com/Pbdas/long-reads

    burki-lab/long-reads’s past year of commit activity
    C++ 0 0 0 0 Updated Mar 1, 2022

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