use updated beagle #3
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: CI Tests | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| shard: [1, 2, 3] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up JDK 11 | |
| uses: actions/setup-java@v2 | |
| with: | |
| java-version: "11" | |
| distribution: "adopt" | |
| - name: Setup Nextflow | |
| uses: nf-core/setup-nextflow@v1 | |
| with: | |
| version: "latest-edge" | |
| - name: Install nf-test | |
| run: | | |
| wget -qO- get.nf-test.com | bash | |
| sudo mv nf-test /usr/local/bin/ | |
| - name: Build Docker | |
| run: docker build -t bystrogenomics/imputationserver2 . | |
| - name: Run Tests (Shard ${{ matrix.shard }}/${{ strategy.job-total }}) | |
| run: nf-test test --ci --shard ${{ matrix.shard }}/${{ strategy.job-total }} |