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  1. CellProfiler/CellProfiler CellProfiler/CellProfiler Public

    An open-source application for biological image analysis

    Python 930 381

  2. COBA-NIH/albumentations_3d COBA-NIH/albumentations_3d Public

    Paired augmentations (image, mask, weight map) for 3D multichannel images

    Python 1 1

  3. COBA-NIH/UNet_3D_C_elegans COBA-NIH/UNet_3D_C_elegans Public

    3D segmentation of the C. elegans germ line

    Jupyter Notebook 1 2

  4. jump-cellpainting/jump-scope-analysis jump-cellpainting/jump-scope-analysis Public

    Jupyter Notebook

  5. Deep_QIBC Deep_QIBC Public

    Python

  6. qibcPlot qibcPlot Public

    R Scripts for QIBC analysis of microscopy images

    R