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R-CMD-check

R-CMD-check #1601

Workflow file for this run

# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
#
# NOTE: This workflow is overkill for most R packages and
# check-standard.yaml is likely a better choice.
# usethis::use_github_action("check-standard") will install it.
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]
schedule:
- cron: '0 0 * * 2'
workflow_dispatch:
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: macOS-latest, cache: '~/Library/Application Support/renv', r: 'release'}
- {os: windows-latest, r: 'release'}
# Use 3.6 to trigger usage of RTools35
# As of 2024-06, downlit now requires R >4.0.0 so this should be deprecated.
# - {os: windows-latest, cache: '~\AppData\Local\renv', r: '3.6'}
# use 4.1 to check with rtools40's older compiler
- {os: windows-latest, r: '4.1'}
- {os: ubuntu-latest, cache: '~/.local/share/renv', r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, cache: '~/.local/share/renv', r: 'release', cov: 'true'}
- {os: ubuntu-latest, cache: '~/.local/share/renv', r: 'oldrel-1'}
- {os: ubuntu-latest, cache: '~/.local/share/renv', r: 'oldrel-2'}
- {os: ubuntu-latest, cache: '~/.local/share/renv', r: 'oldrel-3'}
- {os: ubuntu-latest, cache: '~/.local/share/renv', r: 'oldrel-4'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
RENV_PATHS_ROOT: ${{ matrix.config.cache }}
steps:
- name: Record Linux Version
if: runner.os == 'Linux'
run: |
echo "OS_VERSION=`lsb_release -sr`" >> $GITHUB_ENV
mkdir -p "${{ runner.temp }}/sandbox/"
echo "RENV_PATHS_SANDBOX=${{ runner.temp }}/sandbox/" >> $GITHUB_ENV
- name: "Windows: prevent autocrlf"
if: runner.os == 'Windows'
run: git config --global core.autocrlf false
shell: bash
- uses: actions/checkout@v4
- uses: r-lib/actions/setup-pandoc@v2
- name: "Windows: setup TMPDIR"
if: runner.os == 'Windows'
run: |
git config --global core.autocrlf true # reset setting to prevent errors downstream
echo "TMPDIR=${{ runner.temp }}" >> $GITHUB_ENV
shell: bash
- name: "Setup R"
uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
- name: "Setup dependencies"
uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck
needs: check
- name: "Restore {renv} cache"
if: runner.os != 'Windows'
uses: actions/cache@v4
with:
path: ${{ env.RENV_PATHS_ROOT }}
key: ${{ runner.os }}-${{ env.OS_VERSION }}-renv-${{ runner.r }}-${{ hashFiles('.github/workflows/R-CMD-check.yaml') }}
restore-keys: |
${{ runner.os }}-${{ env.OS_VERSION }}-renv-${{ runner.r }}-
- name: "Prime {renv} Cache"
if: runner.os != 'Windows'
run: |
renv::settings$snapshot.type("explicit")
renv::init()
system('sudo rm -rf renv.lock renv .Rprofile')
system('git clean -fd -e .github')
system('git restore .')
shell: Rscript {0}
- name: "Session info"
run: |
options(width = 100)
pkgs <- installed.packages()[, "Package"]
sessioninfo::session_info(pkgs, include_base = TRUE)
shell: Rscript {0}
- name: "Check"
uses: r-lib/actions/check-r-package@v2
if: runner.os != 'Windows'
with:
upload-snapshots: true
- name: "Check"
uses: r-lib/actions/check-r-package@v2
if: runner.os == 'Windows'
env:
RENV_PATHS_ROOT: ~
with:
upload-snapshots: true