flake8 ok, prepare for release 0.2.1

cbib · Jan 26, 2024 · e8d39e1 · e8d39e1
1 parent 595dff6
commit e8d39e1
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Showing 3 changed files with 3 additions and 4 deletions.
diff --git a/pyproject.toml b/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name="DIMet"
-version="0.2.0"
+version="0.2.1"
 description="A tool for Differential analysis of Isotope-labeled targeted Metabolomics data"
 readme="README.md"
 license = "MIT"

diff --git a/src/dimet/data/__init__.py b/src/dimet/data/__init__.py
@@ -75,7 +75,6 @@ def preload(self):
         else:
             self.sub_folder_absolute = self.config.subfolder
 
-
         # start loading the dataframes
         file_paths = [
             ("metadata", os.path.join(self.sub_folder_absolute,

diff --git a/src/dimet/processing/differential_analysis.py b/src/dimet/processing/differential_analysis.py
@@ -267,8 +267,8 @@ def compute_p_value(df: pd.DataFrame, test: str, best_dist,
         df["pvalue"] = 2 * (
                     1 - best_dist.cdf(abs(df["zscore"]), **args_param))
     else:
-        print(
-            "WARNING: two-tailed or not")  # TODO: clarify the warning message
+        print("WARNING [compute_p_value]: only 'right-tailed' or " 
+              "'two-sided' as test argument supported")
     return df