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Issues list

Add warning if running PE data in SE mode enhancement New feature or request
#14 opened Aug 7, 2024 by cguccione
1
Change from cp to mv to save space enhancement New feature or request
#12 opened Jul 22, 2024 by cguccione
SE mode not working as expected bug Something isn't working
#11 opened Jun 27, 2024 by cguccione
Saving intermediate fastq files after fastp even when SAVE_INTERMEDIATE=1 bug Something isn't working
#10 opened Jun 24, 2024 by cguccione
Improve links to GRCh38 and CHM13 Download documentation Improvements or additions to documentation good first issue Good for newcomers
#8 opened Apr 2, 2024 by cguccione
Pipeline constraints: Uncompressed gz files and "R1/R2" naming
#7 opened Mar 18, 2024 by bdpessem
Code for generating Movi index in the create_indexes.sh
#6 opened Mar 12, 2024 by ammalabbasi
2
Add parallel to conda env
#1 opened Dec 7, 2023 by cguccione
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