-
Notifications
You must be signed in to change notification settings - Fork 155
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Signed-off-by: RJ Sampson <[email protected]>
- Loading branch information
Showing
7 changed files
with
305 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,38 @@ | ||
<!--monopod:start--> | ||
# rstudio | ||
| | | | ||
| - | - | | ||
| **OCI Reference** | `cgr.dev/chainguard/rstudio` | | ||
|
||
|
||
* [View Image in Chainguard Academy](https://edu.chainguard.dev/chainguard/chainguard-images/reference/rstudio/overview/) | ||
* [View Image Catalog](https://console.enforce.dev/images/catalog) for a full list of available tags. | ||
* [Contact Chainguard](https://www.chainguard.dev/chainguard-images) for enterprise support, SLAs, and access to older tags.* | ||
|
||
--- | ||
<!--monopod:end--> | ||
|
||
<!--overview:start--> | ||
Minimal [RStudio](https://github.com/rstudio/rstudio) container image. | ||
<!--overview:end--> | ||
|
||
<!--getting:start--> | ||
## Download this Image | ||
The image is available on `cgr.dev`: | ||
|
||
``` | ||
docker pull cgr.dev/chainguard/rstudio:latest | ||
``` | ||
<!--getting:end--> | ||
|
||
<!--body:start--> | ||
## Running the Image | ||
In order to run RStudio, execute the following command in a terminal: | ||
|
||
```bash | ||
docker run -it -p 8787:8787 cgr.dev/chainguard/rstudio:latest | ||
``` | ||
|
||
The server will now start and the IDE will be accessible at [localhost:8787](http://localhost:8787) in your browser of choice. | ||
|
||
<!--body:end--> |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,89 @@ | ||
terraform { | ||
required_providers { | ||
apko = { source = "chainguard-dev/apko" } | ||
} | ||
} | ||
|
||
variable "extra_packages" { | ||
description = "Additional packages to install." | ||
type = list(string) | ||
default = ["rstudio"] | ||
} | ||
|
||
variable "environment" { | ||
default = {} | ||
} | ||
|
||
module "accts" { | ||
source = "../../../tflib/accts" | ||
run-as = 65532 | ||
uid = 65532 | ||
gid = 65532 | ||
name = "rstudio-server" | ||
} | ||
|
||
output "config" { | ||
value = jsonencode({ | ||
contents = { | ||
packages = var.extra_packages | ||
} | ||
accounts = module.accts.block | ||
environment = merge({ | ||
"CRAN" : "https://cloud.r-project.org" | ||
"USER" : "rstudio-server" | ||
"LANG" : "en_US.UTF-8" | ||
"LANG_WHICH" : "en" | ||
"LANG_WHERE" : "US" | ||
"ENCODING" : "UTF-8" | ||
"LANGUAGE" : "en_US.UTF-8" | ||
"LC_CTYPE" : "en_US" | ||
"TZ" : "UTC" | ||
}) | ||
entrypoint = { | ||
command = "/usr/bin/rserver" | ||
} | ||
paths = [{ | ||
path = "/etc/R" | ||
type = "directory" | ||
uid = module.accts.uid | ||
gid = module.accts.gid | ||
permissions = 509 | ||
recursive = true | ||
}, { | ||
path = "/etc/rstudio" | ||
type = "directory" | ||
uid = module.accts.uid | ||
gid = module.accts.gid | ||
permissions = 509 | ||
recursive = true | ||
}, { | ||
path = "/usr/lib/R" | ||
type = "directory" | ||
uid = module.accts.uid | ||
gid = module.accts.gid | ||
permissions = 509 | ||
recursive = true | ||
}, { | ||
path = "/usr/share/doc/R" | ||
type = "directory" | ||
uid = module.accts.uid | ||
gid = module.accts.gid | ||
permissions = 509 | ||
recursive = true | ||
}, { | ||
path = "/var/run/rstudio-server" | ||
type = "directory" | ||
uid = module.accts.uid | ||
gid = module.accts.gid | ||
permissions = 509 | ||
recursive = true | ||
}, { | ||
path = "/var/lib/rstudio-server" | ||
type = "directory" | ||
uid = module.accts.uid | ||
gid = module.accts.gid | ||
permissions = 509 | ||
recursive = true | ||
}] | ||
}) | ||
} |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,39 @@ | ||
terraform { | ||
required_providers { | ||
oci = { source = "chainguard-dev/oci" } | ||
} | ||
} | ||
|
||
variable "target_repository" { | ||
description = "The docker repo into which the image and attestations should be published." | ||
} | ||
|
||
module "config" { | ||
source = "./config" | ||
} | ||
|
||
module "latest" { | ||
source = "../../tflib/publisher" | ||
name = basename(path.module) | ||
target_repository = var.target_repository | ||
config = module.config.config | ||
build-dev = true | ||
} | ||
|
||
module "test" { | ||
source = "./tests" | ||
|
||
digest = module.latest.image_ref | ||
} | ||
|
||
resource "oci_tag" "latest" { | ||
depends_on = [module.test] | ||
digest_ref = module.latest.image_ref | ||
tag = "latest" | ||
} | ||
|
||
resource "oci_tag" "latest-dev" { | ||
depends_on = [module.test] | ||
digest_ref = module.latest.dev_ref | ||
tag = "latest-dev" | ||
} |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,12 @@ | ||
name: rstudio | ||
image: cgr.dev/chainguard/rstudio | ||
logo: https://storage.googleapis.com/chainguard-academy/logos/rstudio.svg | ||
endoflife: "" | ||
console_summary: "" | ||
short_description: Minimal [RStudio](https://github.com/rstudio/rstudio) container image. | ||
compatibility_notes: "" | ||
readme_file: README.md | ||
upstream_url: https://github.com/rstudio/rstudio | ||
keywords: | ||
- application | ||
- ide |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,16 @@ | ||
terraform { | ||
required_providers { | ||
oci = { source = "chainguard-dev/oci" } | ||
} | ||
} | ||
|
||
variable "digest" { | ||
description = "The image digest to run tests over." | ||
} | ||
|
||
data "oci_string" "ref" { input = var.digest } | ||
|
||
data "oci_exec_test" "smoke" { | ||
digest = var.digest | ||
script = "${path.module}/smoke.sh" | ||
} |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,106 @@ | ||
#!/usr/bin/env bash | ||
|
||
set -o errexit -o nounset -o errtrace -o pipefail -x | ||
|
||
CONTAINER_NAME="rstudio-$(uuidgen)" | ||
|
||
RSTUDIO_PORT="${FREE_PORT}" | ||
|
||
REQUEST_RETRIES=10 | ||
RETRY_DELAY=15 | ||
|
||
declare -a expected_logs=( | ||
"Adding user to cache" | ||
"Running as server user" | ||
"Initialized file locks" | ||
"Connecting to sqlite3 database" | ||
"Creating database connection pool" | ||
"Creating secure key file" | ||
"Using secure key file" | ||
) | ||
declare -a missing_logs=() | ||
|
||
# Validate RStudio installation | ||
# Must be ran before server starts | ||
docker run \ | ||
--rm \ | ||
-p "${RSTUDIO_PORT}":"${RSTUDIO_PORT}" \ | ||
-e "RS_LOG_LEVEL=debug" \ | ||
-e "RS_LOGGER_TYPE=stderr" \ | ||
--name "${CONTAINER_NAME}" \ | ||
--entrypoint rstudio-server \ | ||
"${IMAGE_NAME}" \ | ||
verify-installation | ||
|
||
# Run RStudio server | ||
docker run \ | ||
-d --rm \ | ||
-p "${RSTUDIO_PORT}":"${RSTUDIO_PORT}" \ | ||
-e "RS_LOG_LEVEL=debug" \ | ||
-e "RS_LOGGER_TYPE=stderr" \ | ||
--name "${CONTAINER_NAME}" \ | ||
"${IMAGE_NAME}" \ | ||
--www-port "${RSTUDIO_PORT}" | ||
|
||
# Stop container when script exits | ||
trap "docker stop ${CONTAINER_NAME}" EXIT | ||
|
||
# Validate that RStudio container logs contain expected log messages. | ||
TEST_validate_container_logs() { | ||
for ((i=1; i<=${REQUEST_RETRIES}; i++)); do | ||
local logs=$(docker logs "${CONTAINER_NAME}" 2>&1) | ||
local logs_found=true | ||
|
||
# Search the container logs for our expected log lines. | ||
for log in "${expected_logs[@]}"; do | ||
if ! echo "$logs" | grep -Fq "$log"; then | ||
logs_found=false | ||
fi | ||
done | ||
|
||
if $logs_found; then | ||
return 0 | ||
elif [[ $i -lt ${REQUEST_RETRIES} ]]; then | ||
echo "Some expected logs were missing. Retrying in ${RETRY_DELAY} seconds..." | ||
sleep ${RETRY_DELAY} | ||
fi | ||
done | ||
|
||
# After all retries, record the missing logs | ||
for log in "${expected_logs[@]}"; do | ||
if ! echo "${logs}" | grep -Fq "$log"; then | ||
missing_logs+=("${log}") | ||
fi | ||
done | ||
|
||
echo "FAILED: The following log lines where not found:" | ||
printf '%s\n' "${missing_logs[@]}" | ||
exit 1 | ||
} | ||
|
||
# Check that RStudio responds 200 HTTP status code indicating it's operational. | ||
TEST_http_response() { | ||
for ((i=1; i<=${REQUEST_RETRIES}; i++)); do | ||
if [ $(curl -o /dev/null -s -w "%{http_code}" "http://localhost:${RSTUDIO_PORT}/unsupported_browser.htm") -eq 200 ]; then | ||
return 0 | ||
fi | ||
sleep ${RETRY_DELAY} | ||
done | ||
|
||
echo "FAILED: Did not receive 200 HTTP response from RStudio after ${REQUEST_RETRIES} attempts." | ||
exit 1 | ||
} | ||
|
||
TEST_install_package() { | ||
# Install R package | ||
docker exec "${CONTAINER_NAME}" \ | ||
Rscript -e 'install.packages("ggplot2", repos = "https://cloud.r-project.org")' | ||
|
||
# Import library | ||
docker exec "${CONTAINER_NAME}" \ | ||
Rscript -e 'library("ggplot2")' | ||
} | ||
|
||
TEST_validate_container_logs | ||
TEST_http_response | ||
TEST_install_package |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters