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Fix NOTE about namespace.
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charles-plessy committed Jul 26, 2023
1 parent e54e514 commit 8413b71
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions R/ShiftingMethods.R
Original file line number Diff line number Diff line change
Expand Up @@ -304,14 +304,14 @@ setMethod( "scoreShift", "CAGEexp"
## adjust colnames for columns in temp_df2
colnames(temp_df2) <- paste(c("pvalue.KS", "fdr.KS"),
group_x_str, group_y_str, sep=".")
temp_df <- cbind.DataFrame(temp_df, temp_df2)
temp_df <- cbind(temp_df, temp_df2)
}


prior_rowdata <- rowData(consensusClustersSE(object))


use_df <- cbind.DataFrame(prior_rowdata, temp_df)
use_df <- cbind(prior_rowdata, temp_df)

## manage duplicate columns
use_df <- use_df[ , !duplicated(colnames(use_df))]
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