Skip to content
@cmmr

Alkek Center for Metagenomics and Microbiome Research

CMMR researchers develop molecular and informatic tools to advance clinical microbiome research.

Pinned Loading

  1. EsViritu EsViritu Public

    Read mapping pipeline for detection and measurement of virus pathogens from metagenomic or clinical data

    Shell 22 3

  2. Marker-MAGu Marker-MAGu Public

    Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes

    Python 9

  3. virmap virmap Public

    Perl 25 14

Repositories

Showing 10 of 12 repositories
  • rbiom Public

    Interact with Biological Observation Matrix files.

    cmmr/rbiom’s past year of commit activity
    R 12 0 3 0 Updated Jan 11, 2025
  • webqueue Public

    HTTP Server Using Multiple CPU Cores

    cmmr/webqueue’s past year of commit activity
    R 0 0 0 0 Updated Dec 3, 2024
  • jobqueue Public

    Queue and Run Asynchronous Interruptible R Tasks on Background Processes

    cmmr/jobqueue’s past year of commit activity
    R 0 0 0 0 Updated Nov 23, 2024
  • semaphore Public

    Shared Memory Atomic Operations in R

    cmmr/semaphore’s past year of commit activity
    R 1 0 0 0 Updated Nov 13, 2024
  • fillpattern Public

    Patterned Fills for 'ggplot2' and 'grid' Graphics

    cmmr/fillpattern’s past year of commit activity
    R 5 0 0 0 Updated Jun 24, 2024
  • TX_wastewater_virome Public
    cmmr/TX_wastewater_virome’s past year of commit activity
    HTML 5 0 1 0 Updated Mar 7, 2024
  • EsViritu Public

    Read mapping pipeline for detection and measurement of virus pathogens from metagenomic or clinical data

    cmmr/EsViritu’s past year of commit activity
    Shell 22 MIT 3 7 0 Updated Nov 27, 2023
  • Marker-MAGu Public

    Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes

    cmmr/Marker-MAGu’s past year of commit activity
    Python 9 MIT 0 2 0 Updated Oct 17, 2023
  • virmap Public
    cmmr/virmap’s past year of commit activity
    Perl 25 AGPL-3.0 14 17 0 Updated Feb 2, 2021
  • covid Public archive

    COVID-19 Dashboard coded in Shiny R

    cmmr/covid’s past year of commit activity
    R 0 AGPL-3.0 1 0 0 Updated Jun 26, 2020
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Most used topics

Loading…