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tinatownes authored and nmdefries committed Jul 23, 2024
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2 changes: 1 addition & 1 deletion .bumpversion.cfg
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[bumpversion]
current_version = 4.1.23
current_version = 4.1.24
commit = False
tag = False

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# style(black): format wiki acquisition
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# lint: trailing whitespace changes
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2 changes: 1 addition & 1 deletion dev/local/setup.cfg
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[metadata]
name = Delphi Development
version = 4.1.23
version = 4.1.24

[options]
packages =
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15 changes: 15 additions & 0 deletions docs/DelphiResearchGroup.md
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---
title: The Delphi Research Group
nav_order: 6
has_children: false
---

# About The Delphi Group

The Delphi Group's mission is to develop the theory and practice of epidemic detection, tracking and forecasting, and their use in decision making, both public and private.

Our vision is to make this technology as useful as weather forecasting is today.

Find out more about the Delphi Research Group on our <a href="https://delphi.cmu.edu" target="_blank">offical webpage</a>.
Please read our <a href="https://delphi.cmu.edu/blog" target="_blank">blog</a> for additional news, findings, and musings from the team.

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---
title: CDC
parent: Other Endpoints
nav_order: 1
---

# CDC
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2 changes: 1 addition & 1 deletion docs/api/client_libraries.md
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Expand Up @@ -12,7 +12,7 @@ To access Delphi Epidata programmatically, we recommend our client libraries:
- Python: [delphi-epidata](https://pypi.org/project/delphi-epidata/) (soon to be replaced with [epidatpy](https://github.com/cmu-delphi/epidatpy)),
- Javascript: [delphi-epidata](https://github.com/cmu-delphi/delphi-epidata/blob/master/src/client/delphi_epidata.js).

For anyone looking for COVIDCast data, please visit our [COVIDCast Libraries](covidcast_clients.md).
For anyone looking for COVIDCast data, please visit our [COVIDCast API Client Libraries](covidcast_clients.md).

The following samples show how to import the library and fetch Delphi's
COVID-19 Surveillance Streams from Facebook Survey CLI for county 06001 and days
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1 change: 1 addition & 0 deletions docs/api/covid_hosp.md
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---
title: COVID-19 Reported Patient Impact and Hospital Capacity by State Timeseries
parent: Other Endpoints
nav_order: 1
---

# COVID-19 Hospitalization by State
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---
title: COVID-19 Reported Patient Impact and Hospital Capacity by Facility
parent: Other Endpoints
nav_order: 1
---

# COVID-19 Hospitalization by Facility
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---
title: COVID-19 Reported Patient Impact and Hospital Capacity - Facility lookup
parent: Other Endpoints
nav_order: 1
---

# COVID-19 Hospitalization: Facility Lookup
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title: Change Healthcare
parent: Data Sources and Signals
grand_parent: COVIDcast Main Endpoint
nav_order: 1
---

# Change Healthcare
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1 change: 1 addition & 0 deletions docs/api/covidcast-signals/covid-act-now.md
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---
title: COVID Act Now (inactive)
parent: Data Sources and Signals
nav_order: 2
grand_parent: COVIDcast Main Endpoint
---

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1 change: 1 addition & 0 deletions docs/api/covidcast-signals/doctor-visits.md
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title: Doctor Visits
parent: Data Sources and Signals
grand_parent: COVIDcast Main Endpoint
nav_order: 1
---

# Doctor Visits
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1 change: 1 addition & 0 deletions docs/api/covidcast-signals/dsew-cpr.md
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---
title: Data Strategy and Execution Workgroup Community Profile Report (inactive)
parent: Data Sources and Signals
nav_order: 2
grand_parent: COVIDcast Main Endpoint
---

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5 changes: 3 additions & 2 deletions docs/api/covidcast-signals/fb-survey.md
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---
title: COVID-19 Trends and Impact Survey (inactive)
title: COVID-19 Trends and Impact Survey 2020-2022 (inactive)
parent: Data Sources and Signals
grand_parent: COVIDcast Main Endpoint
nav_order: 2
---

# COVID-19 Trends and Impact Survey
# COVID-19 Trends and Impact Survey 2020-2022 (Facebook Survey)
{: .no_toc}

* **Source name:** `fb-survey`
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---
title: Google Health Trends
parent: Inactive Signals
nav_order: 2
grand_parent: COVIDcast Main Endpoint
---

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title: Google Symptom Surveys (inactive)
parent: Data Sources and Signals
grand_parent: COVIDcast Main Endpoint
nav_order: 1
---

# Google Symptom Surveys
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---
title: Google Search Trends Symptoms (inactive)
parent: Data Sources and Signals
nav_order: 2
grand_parent: COVIDcast Main Endpoint
---

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---
title: Department of Health & Human Services (inactive)
parent: Data Sources and Signals
nav_order: 2
grand_parent: COVIDcast Main Endpoint
---

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title: Hospital Admissions
parent: Data Sources and Signals
grand_parent: COVIDcast Main Endpoint
nav_order: 1
---

# Hospital Admissions
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title: Indicator Combination (inactive)
parent: Data Sources and Signals
grand_parent: COVIDcast Main Endpoint
nav_order: 1
---

# Indicator Combination
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1 change: 1 addition & 0 deletions docs/api/covidcast-signals/jhu-csse.md
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---
title: JHU Cases and Deaths (inactive)
parent: Data Sources and Signals
nav_order: 2
grand_parent: COVIDcast Main Endpoint
---

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title: NCHS Mortality Data
parent: Data Sources and Signals
grand_parent: COVIDcast Main Endpoint
nav_order: 1
---

# NCHS Mortality Data
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title: NSSP ED Visits
parent: Data Sources and Signals
grand_parent: COVIDcast Main Endpoint
nav_order: 1
---
# National Syndromic Surveillance Program Emergency Department Visits
{: .no_toc}
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title: Quidel
parent: Data Sources and Signals
grand_parent: COVIDcast Main Endpoint
nav_order: 1
---

# Quidel
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1 change: 1 addition & 0 deletions docs/api/covidcast-signals/safegraph.md
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---
title: SafeGraph (inactive)
parent: Data Sources and Signals
nav_order: 2
grand_parent: COVIDcast Main Endpoint
---

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---
title: USAFacts Cases and Deaths (inactive)
parent: Data Sources and Signals
nav_order: 2
grand_parent: COVIDcast Main Endpoint
---

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has_children: true

---
# Delphi's COVID-19 Data Sources and Signals

Delphi's COVID-19 Surveillance Streams data includes the following data sources.
Data from most of these sources is typically updated daily. You can use the
[`covidcast_meta`](covidcast_meta.md) endpoint to get summary information
about the ranges of the different attributes for the different data sources.

The API for retrieving data from these sources is described in the
[COVIDcast endpoint documentation](covidcast.md). Changes and corrections to
data from this endpoint are listed in the [changelog](covidcast_changelog.md).

To obtain many of these signals and update them daily, Delphi has written
extensive software to obtain data from various sources, aggregate the data,
calculate statistical estimates, and format the data to be shared through the
COVIDcast endpoint of the Delphi Epidata API. This code is
[open source and available on GitHub](https://github.com/cmu-delphi/covidcast-indicators),
and contributions are welcome.

## COVIDcast Dashboard Signals

The following signals are currently displayed on [the public COVIDcast
dashboard](https://delphi.cmu.edu/covidcast/):

| Kind | Name | Source | Signal |
|---|---|---|---|
| Public Behavior | People Wearing Masks | [`fb-survey`](covidcast-signals/fb-survey.md) | `smoothed_wwearing_mask_7d` |
| Public Behavior | Vaccine Acceptance | [`fb-survey`](covidcast-signals/fb-survey.md) | `smoothed_wcovid_vaccinated_appointment_or_accept` |
| Public Behavior | COVID Symptom Searches on Google | [`google-symptoms`](covidcast-signals/google-symptoms.md) | `sum_anosmia_ageusia_smoothed_search` |
| Early Indicators | COVID-Like Symptoms | [`fb-survey`](covidcast-signals/fb-survey.md) | `smoothed_wcli` |
| Early Indicators | COVID-Like Symptoms in Community | [`fb-survey`](covidcast-signals/fb-survey.md) | `smoothed_whh_cmnty_cli` |
| Early Indicators | COVID-Related Doctor Visits | [`doctor-visits`](covidcast-signals/doctor-visits.md) | `smoothed_adj_cli` |
| Cases and Testing | COVID Cases | [`jhu-csse`](covidcast-signals/jhu-csse.md) | `confirmed_7dav_incidence_prop` |
| Late Indicators | COVID Hospital Admissions | [`hhs`](covidcast-signals/hhs.md) | `confirmed_admissions_covid_1d_prop_7dav` |
| Late Indicators | Deaths | [`jhu-csse`](covidcast-signals/jhu-csse.md) | `deaths_7dav_incidence_prop` |

## All Available Sources and Signals

Beyond the signals available on the COVIDcast dashboard, numerous other signals are
available through our [data export tool](https://delphi.cmu.edu/covidcast/export/) or directly through the API:
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---
title: Delphi Forecasts
parent: Other Endpoints
nav_order: 1
---

# Delphi Forecasts
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---
title: Dengue Nowcast
parent: Other Endpoints
nav_order: 1
---

# Delphi's Dengue Nowcast
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---
title: Dengue Digital Surveillance
parent: Other Endpoints
nav_order: 1
---

# Dengue Digital Surveillance Sensors
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---
title: ECDC ILI
parent: Other Endpoints
nav_order: 1
---

# ECDC ILI
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---
title: Flusurv
parent: Other Endpoints
nav_order: 1
---

# FluSurv
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---
title: FluView
parent: Other Endpoints
nav_order: 1
---

# FluView
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1 change: 1 addition & 0 deletions docs/api/fluview_clinical.md
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---
title: FluView Clinical
parent: Other Endpoints
nav_order: 1
---

# FluView Clinical
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---
title: FluView metadata
parent: Other Endpoints
nav_order: 1
---

# FluView metadata
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