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Add afhsb to epivis #1

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Add afhsb to epivis #1

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98 changes: 98 additions & 0 deletions site/epivis.html
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Original file line number Diff line number Diff line change
Expand Up @@ -69,6 +69,8 @@ <h1>Load from Epidata API</h1>
<br />
<div class="option_label"><label><input type="radio" name="source_radio" id="radio_quidel" /> Quidel Data</label></div><span class="explanation">(source: private Quidel dataset)</span>
<br />
<div class="option_label"><label><input type="radio" name="source_radio" id="radio_afhsb" /> AFHSB Data</label></div><span class="explanation">(source: private AFHSB dataset)</span>
<br />
<div class="option_label"><label><input type="radio" name="source_radio" id="radio_nidss_flu" /> NIDSS - Influenza</label></div><span class="explanation">(source: <a target="_blank" href="http://nidss.cdc.gov.tw/en/CDCWNH01.aspx?dc=wnh">nidss.cdc.gov.tw</a>)</span>
<br />
<div class="option_label"><label><input type="radio" name="source_radio" id="radio_nidss_dengue" /> NIDSS - Dengue</label></div><span class="explanation">(source: <a target="_blank" href="http://nidss.cdc.gov.tw/en/SingleDisease.aspx?dc=1&amp;dt=4&amp;disease=061&amp;position=1">nidss.cdc.gov.tw</a>)</span>
Expand Down Expand Up @@ -733,6 +735,101 @@ <h1>Load from Epidata API</h1>
</div><span class="explanation">(location to filter data by)</span>
</div>
<br />
<div class="csv_options" id="radio_afhsb_options" style="display: none;">
<div class="option_label">
<input type="text" name="text_afhsb_auth" id="text_afhsb_auth" size="8" />
</div><span class="explanation">(authorization token)</span>
<br />
<div class="option_label">
<select name="select_afhsb_location" id="select_afhsb_location">
<option value="usa" selected="selected">U.S. National</option>
<option value="hhs1">HHS Region 1</option>
<option value="hhs2">HHS Region 2</option>
<option value="hhs3">HHS Region 3</option>
<option value="hhs4">HHS Region 4</option>
<option value="hhs5">HHS Region 5</option>
<option value="hhs6">HHS Region 6</option>
<option value="hhs7">HHS Region 7</option>
<option value="hhs8">HHS Region 8</option>
<option value="hhs9">HHS Region 9</option>
<option value="hhs10">HHS Region 10</option>
<option value="cen1">Census Region 1</option>
<option value="cen2">Census Region 2</option>
<option value="cen3">Census Region 3</option>
<option value="cen4">Census Region 4</option>
<option value="cen5">Census Region 5</option>
<option value="cen6">Census Region 6</option>
<option value="cen7">Census Region 7</option>
<option value="cen8">Census Region 8</option>
<option value="cen9">Census Region 9</option>
<option value="AK">AK</option>
<option value="AL">AL</option>
<option value="AR">AR</option>
<option value="AZ">AZ</option>
<option value="CA">CA</option>
<option value="CO">CO</option>
<option value="CT">CT</option>
<option value="DC">DC</option>
<option value="DE">DE</option>
<option value="FL">FL</option>
<option value="GA">GA</option>
<option value="HI">HI</option>
<option value="IA">IA</option>
<option value="ID">ID</option>
<option value="IL">IL</option>
<option value="IN">IN</option>
<option value="KS">KS</option>
<option value="KY">KY</option>
<option value="LA">LA</option>
<option value="MA">MA</option>
<option value="MD">MD</option>
<option value="ME">ME</option>
<option value="MI">MI</option>
<option value="MN">MN</option>
<option value="MO">MO</option>
<option value="MS">MS</option>
<option value="MT">MT</option>
<option value="NC">NC</option>
<option value="ND">ND</option>
<option value="NE">NE</option>
<option value="NH">NH</option>
<option value="NJ">NJ</option>
<option value="NM">NM</option>
<option value="NV">NV</option>
<option value="NY">NY</option>
<option value="OH">OH</option>
<option value="OK">OK</option>
<option value="OR">OR</option>
<option value="PA">PA</option>
<option value="RI">RI</option>
<option value="SC">SC</option>
<option value="SD">SD</option>
<option value="TN">TN</option>
<option value="TX">TX</option>
<option value="UT">UT</option>
<option value="VA">VA</option>
<option value="VT">VT</option>
<option value="WA">WA</option>
<option value="WI">WI</option>
<option value="WV">WV</option>
<option value="WY">WY</option>
</select>
</div><span class="explanation">(location to filter data by)</span>
<br />
<div class="option_label">
<select name="select_afhsb_flutype" id="select_afhsb_flutype">
<option value="ili" selected="selected">ILI</option>
<option value="flu1">Flu1</option>
<option value="flu2">Flu2</option>
<option value="flu3">Flu3</option>
<option value="flu2-flu1">Flu2-Flu1</option>
<option value="flu3-flu2">Flu3-Flu2</option>
<option value="ili-flu3">ILI-Flu3</option>
</select>
</div><span class="explanation">(flu-type to filter data by)</span>
<br />
</div>
<br />
<div class="csv_options" id="radio_nidss_flu_options" style="display: none;">
<div class="option_label">
<select name="select_nidss_flu_region" id="select_nidss_flu_region">
Expand Down Expand Up @@ -815,6 +912,7 @@ <h1>Load from Epidata API</h1>
<option value="wiki">wiki</option>
<option value="cdc">cdc</option>
<option value="quid">quid</option>
<option value="afhsb">afhsb</option>
<option value="epic">epic</option>
<option value="sar3">sar3</option>
<option value="arch">arch</option>
Expand Down
11 changes: 11 additions & 0 deletions site/js/app.js
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Original file line number Diff line number Diff line change
Expand Up @@ -86,6 +86,7 @@ function run() {
"radio_nidss_dengue",
"radio_cdc",
"radio_quidel",
"radio_afhsb",
"radio_sensors",
"radio_nowcast"
]);
Expand Down Expand Up @@ -411,6 +412,16 @@ function loadEpidata() {
var title = "Quidel Data: " + location_t;
Epidata.fetchQuidel(successFunction(title), onFailure, auth, location_v);
})();
} else if ($("#radio_afhsb").is(":checked")) {
(function() {
var auth = $("#text_afhsb_auth").val();
var location_v = $("#select_afhsb_location :selected").val();
var location_t = $("#select_afhsb_location :selected").text();
var flutype_v = $("#select_afhsb_flutype :selected").val();
var flutype_t = $("#select_afhsb_flutype :selected").text();
var title = "AFHSB Data: " + location_t + ', ' + flutype_t;
Epidata.fetchAFHSB(successFunction(title), onFailure, auth, location_v, flutype_v);
})();
} else if ($("#radio_sensors").is(":checked")) {
(function() {
var auth = $("#text_sensors_auth").val();
Expand Down
9 changes: 9 additions & 0 deletions site/js/epidata.js
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Original file line number Diff line number Diff line change
Expand Up @@ -30,6 +30,7 @@ var Epidata = (function() {
'nidss_dengue': 200301,
'cdc': 201301,
'quidel': 201535,
'afhsb': 200001,
'sensors': 201030,
'nowcast': 200901,
};
Expand All @@ -47,6 +48,7 @@ var Epidata = (function() {
function loadEpidata(epidata, columns) {
var datasets, points, row, col, year, week, date;
datasets = [];
console.log(epidata.length);
for(col = 0; col < columns.length; col++) {
points = [];
for(row = 0; row < epidata.length; row++) {
Expand All @@ -59,6 +61,7 @@ var Epidata = (function() {
} else {
throw {'msg': 'missing column "date" and "epiweek"'};
}
console.log(year, week, epidata[row][columns[col]]);
points.push(new EpiVis.Point(date, epidata[row][columns[col]]));
}
datasets.push(new EpiVis.Dataset(points, columns[col]));
Expand All @@ -77,6 +80,7 @@ var Epidata = (function() {
}
if(result >= 1) {
// success
console.log("success");
onSuccess(loadEpidata(epidata, columns));
}
}
Expand Down Expand Up @@ -130,6 +134,11 @@ var Epidata = (function() {
var columns = ['value'];
api.quidel(getCallback(onSuccess, onFailure, columns), auth, [api.range(first_epiweek.quidel, current_epiweek)], location);
},
fetchAFHSB: function(onSuccess, onFailure, auth, location, flu_type) {
var columns = ['visit_sum'];
console.log(location, flu_type)
api.afhsb(getCallback(onSuccess, onFailure, columns), auth, location, [api.range(first_epiweek.afhsb, current_epiweek)], flu_type);
},
fetchNIDSS_flu: function(onSuccess, onFailure, region, issue, lag) {
var columns = ['visits', 'ili'];
api.nidss_flu(getCallback(onSuccess, onFailure, columns), region, [api.range(first_epiweek.nidss_flu, current_epiweek)], issue, lag);
Expand Down