-
Notifications
You must be signed in to change notification settings - Fork 47
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Evaluate performance of covariates at predicting various mutations (#47)
* Evaluate performance of covariates on TP53 Creates an explore directory and README for this type of exploratory notebook. See how well covariates (non-expression features) predict TP53 mutation. Related to #8: General mutation-load does provide some ability to predict mutation status of TP53. Partially addresses #21: Covariates are extracted from samples.tsv. * Evaluate more covariate/mutation combinations Evaluate covariate-only classifiers for the interesting mutations compiled in cognoma/cancer-data#22 (comment). Switches to an expand grid system for evaluating all possible covariate combinations. Plot performance of all covariates on each mutation. Switches to `covariates.tsv` created in cognoma/cancer-data#24 for encoded covariates. * Export clean notebook to script * Address review comments
- Loading branch information
Showing
5 changed files
with
1,149 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,9 @@ | ||
| # A directory for exploratory machine learning analyses | ||
|
|
||
| This directory is home to exploratory analyses that help answer questions about how we should do machine learning. For algorithm implementations see the [`algorithms`](../algorithms) directory. For other types of analyses, place them here. | ||
|
|
||
| Notebooks should be exported to scripts for review. For example, from the directory containing your scripts run: | ||
|
|
||
| ```sh | ||
| jupyter nbconvert --to=script *.ipynb | ||
| ``` |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,3 @@ | ||
| This analysis looks into covariates and their potential confounding effects. | ||
|
|
||
| Specifically, we find that disease type, gender, and mutation burden predict _TP53_ mutation with AUROC = 84%. |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,249 @@ | ||
| mutation disease_covariate organ_covariate gender_covariate mutation_covariate survival_covariate symbol positive_prevalence mean_cv_auroc training_auroc testing_auroc | ||
| 238 1 0 0 1 1 ALK 0.018889 0.85642 0.82764 0.84673 | ||
| 238 1 0 1 1 0 ALK 0.018889 0.85762 0.82936 0.84633 | ||
| 238 1 0 1 1 1 ALK 0.018889 0.85618 0.82939 0.84613 | ||
| 238 1 1 1 1 0 ALK 0.018889 0.85385 0.82907 0.84604 | ||
| 238 1 1 1 1 1 ALK 0.018889 0.85313 0.82821 0.84564 | ||
| 238 0 1 1 1 1 ALK 0.018889 0.85275 0.82823 0.84135 | ||
| 238 0 1 1 1 0 ALK 0.018889 0.85362 0.82817 0.84085 | ||
| 238 0 0 1 1 0 ALK 0.018889 0.8477 0.82684 0.83622 | ||
| 238 1 1 0 1 1 ALK 0.018889 0.85368 0.83335 0.83528 | ||
| 238 1 1 0 1 0 ALK 0.018889 0.85243 0.83322 0.83508 | ||
| 238 1 0 0 1 0 ALK 0.018889 0.85629 0.82957 0.83488 | ||
| 238 0 0 1 1 1 ALK 0.018889 0.8476 0.82754 0.83274 | ||
| 238 0 0 0 1 1 ALK 0.018889 0.84552 0.82696 0.82865 | ||
| 238 0 1 0 1 1 ALK 0.018889 0.85331 0.83747 0.81236 | ||
| 238 0 1 0 1 0 ALK 0.018889 0.85211 0.83829 0.80524 | ||
| 238 0 1 0 0 1 ALK 0.018889 0.78255 0.76903 0.70129 | ||
| 238 0 1 0 0 0 ALK 0.018889 0.77866 0.76335 0.69586 | ||
| 238 0 1 1 0 0 ALK 0.018889 0.77725 0.76281 0.69506 | ||
| 238 0 1 1 0 1 ALK 0.018889 0.78244 0.7626 0.69406 | ||
| 238 1 0 1 0 0 ALK 0.018889 0.77592 0.77116 0.69327 | ||
| 238 1 0 1 0 1 ALK 0.018889 0.78126 0.77554 0.68574 | ||
| 238 1 0 0 0 1 ALK 0.018889 0.78142 0.77687 0.68405 | ||
| 238 1 1 1 0 0 ALK 0.018889 0.78731 0.76632 0.68315 | ||
| 238 1 1 1 0 1 ALK 0.018889 0.79123 0.76632 0.68315 | ||
| 238 1 0 0 0 0 ALK 0.018889 0.77786 0.7709 0.68295 | ||
| 238 1 1 0 0 0 ALK 0.018889 0.78553 0.7541 0.6829 | ||
| 238 1 1 0 0 1 ALK 0.018889 0.79121 0.76059 0.67533 | ||
| 238 0 0 0 0 1 ALK 0.018889 0.51956 0.50443 0.60007 | ||
| 238 0 0 1 0 0 ALK 0.018889 0.57719 0.54399 0.565 | ||
| 238 0 0 1 0 1 ALK 0.018889 0.57671 0.54399 0.565 | ||
| 238 0 0 0 1 0 ALK 0.018889 0.84524 0.17316 0.16378 | ||
| 672 1 0 0 1 0 BRCA1 0.018615 0.84055 0.8314 0.86103 | ||
| 672 1 0 1 1 0 BRCA1 0.018615 0.83859 0.8314 0.86103 | ||
| 672 0 1 1 1 0 BRCA1 0.018615 0.83636 0.83073 0.86006 | ||
| 672 0 1 0 1 0 BRCA1 0.018615 0.83632 0.83074 0.86006 | ||
| 672 0 1 0 1 1 BRCA1 0.018615 0.83624 0.83074 0.86006 | ||
| 672 0 1 1 1 1 BRCA1 0.018615 0.83628 0.8309 0.86006 | ||
| 672 1 1 0 1 0 BRCA1 0.018615 0.83635 0.83116 0.86006 | ||
| 672 1 1 1 1 0 BRCA1 0.018615 0.83634 0.83113 0.86006 | ||
| 672 1 0 0 1 1 BRCA1 0.018615 0.83862 0.82585 0.85291 | ||
| 672 1 0 1 1 1 BRCA1 0.018615 0.83864 0.82585 0.85291 | ||
| 672 1 1 0 1 1 BRCA1 0.018615 0.83638 0.82333 0.8475 | ||
| 672 1 1 1 1 1 BRCA1 0.018615 0.8364 0.82333 0.8475 | ||
| 672 0 0 1 1 0 BRCA1 0.018615 0.82859 0.81965 0.83918 | ||
| 672 0 0 0 1 0 BRCA1 0.018615 0.82738 0.81799 0.83544 | ||
| 672 0 0 0 1 1 BRCA1 0.018615 0.82738 0.81799 0.83544 | ||
| 672 0 0 1 1 1 BRCA1 0.018615 0.82738 0.81799 0.83544 | ||
| 672 1 0 0 0 1 BRCA1 0.018615 0.7033 0.75681 0.71179 | ||
| 672 0 1 0 0 1 BRCA1 0.018615 0.71455 0.75257 0.7113 | ||
| 672 1 0 1 0 0 BRCA1 0.018615 0.72292 0.75269 0.70943 | ||
| 672 0 1 1 0 1 BRCA1 0.018615 0.71844 0.75269 0.70763 | ||
| 672 1 0 1 0 1 BRCA1 0.018615 0.71953 0.75806 0.707 | ||
| 672 1 0 0 0 0 BRCA1 0.018615 0.72229 0.75222 0.7052 | ||
| 672 1 1 1 0 0 BRCA1 0.018615 0.72895 0.75386 0.7025 | ||
| 672 1 1 0 0 0 BRCA1 0.018615 0.72504 0.75177 0.7016 | ||
| 672 0 1 1 0 0 BRCA1 0.018615 0.72877 0.75015 0.69945 | ||
| 672 0 1 0 0 0 BRCA1 0.018615 0.72111 0.7484 0.69861 | ||
| 672 1 1 0 0 1 BRCA1 0.018615 0.72 0.71965 0.66907 | ||
| 672 1 1 1 0 1 BRCA1 0.018615 0.72568 0.71965 0.66907 | ||
| 672 0 0 1 0 1 BRCA1 0.018615 0.54317 0.53337 0.53564 | ||
| 672 0 0 0 0 1 BRCA1 0.018615 0.53768 0.5 0.5 | ||
| 672 0 0 1 0 0 BRCA1 0.018615 0.52635 0.50191 0.45798 | ||
| 675 0 0 0 1 0 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 0 0 0 1 1 BRCA2 0.032439 0.8235 0.79603 0.88723 | ||
| 675 0 0 1 1 0 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 0 0 1 1 1 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 0 1 0 1 0 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 0 1 0 1 1 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 0 1 1 1 0 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 0 1 1 1 1 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 1 0 0 1 0 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 1 0 0 1 1 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 1 0 1 1 0 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 1 0 1 1 1 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 1 1 0 1 0 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 1 1 0 1 1 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 1 1 1 1 0 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 1 1 1 1 1 BRCA2 0.032439 0.82343 0.79603 0.88723 | ||
| 675 0 1 1 0 1 BRCA2 0.032439 0.69087 0.71246 0.80843 | ||
| 675 1 1 1 0 1 BRCA2 0.032439 0.69176 0.71708 0.80458 | ||
| 675 0 1 1 0 0 BRCA2 0.032439 0.69254 0.71312 0.80346 | ||
| 675 0 1 0 0 1 BRCA2 0.032439 0.69183 0.71193 0.80284 | ||
| 675 1 1 1 0 0 BRCA2 0.032439 0.69065 0.71562 0.80281 | ||
| 675 1 1 0 0 1 BRCA2 0.032439 0.69176 0.71874 0.7994 | ||
| 675 0 1 0 0 0 BRCA2 0.032439 0.69146 0.71288 0.79498 | ||
| 675 1 0 1 0 1 BRCA2 0.032439 0.68641 0.7158 0.79288 | ||
| 675 1 0 0 0 1 BRCA2 0.032439 0.68913 0.71485 0.79149 | ||
| 675 1 0 1 0 0 BRCA2 0.032439 0.68932 0.71682 0.79034 | ||
| 675 1 0 0 0 0 BRCA2 0.032439 0.69165 0.71541 0.78996 | ||
| 675 1 1 0 0 0 BRCA2 0.032439 0.69176 0.71744 0.78448 | ||
| 675 0 0 1 0 1 BRCA2 0.032439 0.58062 0.5581 0.61077 | ||
| 675 0 0 0 0 1 BRCA2 0.032439 0.55403 0.52461 0.57545 | ||
| 675 0 0 1 0 0 BRCA2 0.032439 0.55441 0.54702 0.57182 | ||
| 29126 0 0 1 1 0 CD274 0.0026006 0.92574 0.82964 0.9219 | ||
| 29126 0 0 1 1 1 CD274 0.0026006 0.93361 0.78557 0.89697 | ||
| 29126 0 0 0 1 1 CD274 0.0026006 0.93557 0.86543 0.87713 | ||
| 29126 0 0 0 1 0 CD274 0.0026006 0.92561 0.86562 0.8741 | ||
| 29126 0 1 0 1 0 CD274 0.0026006 0.92561 0.87603 0.86708 | ||
| 29126 0 1 0 1 1 CD274 0.0026006 0.92561 0.87603 0.86708 | ||
| 29126 0 1 1 1 0 CD274 0.0026006 0.9269 0.87603 0.86708 | ||
| 29126 0 1 1 1 1 CD274 0.0026006 0.92561 0.87603 0.86708 | ||
| 29126 1 0 0 1 0 CD274 0.0026006 0.92561 0.87603 0.86708 | ||
| 29126 1 0 0 1 1 CD274 0.0026006 0.92561 0.87603 0.86708 | ||
| 29126 1 0 1 1 0 CD274 0.0026006 0.92655 0.87603 0.86708 | ||
| 29126 1 0 1 1 1 CD274 0.0026006 0.92561 0.87603 0.86708 | ||
| 29126 1 1 0 1 0 CD274 0.0026006 0.92561 0.87559 0.86598 | ||
| 29126 1 1 0 1 1 CD274 0.0026006 0.92561 0.87559 0.86598 | ||
| 29126 1 1 1 1 0 CD274 0.0026006 0.92561 0.87559 0.86598 | ||
| 29126 1 1 1 1 1 CD274 0.0026006 0.92561 0.87559 0.86598 | ||
| 29126 0 0 1 0 1 CD274 0.0026006 0.62654 0.59426 0.78388 | ||
| 29126 0 0 1 0 0 CD274 0.0026006 0.64024 0.56949 0.76033 | ||
| 29126 1 0 1 0 0 CD274 0.0026006 0.81727 0.88121 0.72824 | ||
| 29126 1 1 1 0 0 CD274 0.0026006 0.76515 0.82536 0.70785 | ||
| 29126 0 1 0 0 0 CD274 0.0026006 0.71433 0.6496 0.57287 | ||
| 29126 0 1 0 0 1 CD274 0.0026006 0.742 0.6496 0.57287 | ||
| 29126 1 0 0 0 0 CD274 0.0026006 0.71125 0.6496 0.57287 | ||
| 29126 1 0 0 0 1 CD274 0.0026006 0.75034 0.6496 0.57287 | ||
| 29126 1 1 0 0 0 CD274 0.0026006 0.71125 0.6496 0.57287 | ||
| 29126 1 1 0 0 1 CD274 0.0026006 0.71125 0.6496 0.57287 | ||
| 29126 1 1 1 0 1 CD274 0.0026006 0.79372 0.6496 0.57287 | ||
| 29126 0 1 1 0 0 CD274 0.0026006 0.82562 0.6745 0.5646 | ||
| 29126 0 1 1 0 1 CD274 0.0026006 0.79327 0.70564 0.55799 | ||
| 29126 0 0 0 0 1 CD274 0.0026006 0.53146 0.55083 0.54504 | ||
| 29126 1 0 1 0 1 CD274 0.0026006 0.79784 0.7308 0.54256 | ||
| 4221 0 1 0 1 0 MEN1 0.0078018 0.83516 0.83394 0.90351 | ||
| 4221 1 1 0 1 0 MEN1 0.0078018 0.85521 0.83546 0.84057 | ||
| 4221 1 0 0 1 0 MEN1 0.0078018 0.85524 0.83897 0.83564 | ||
| 4221 1 1 1 1 0 MEN1 0.0078018 0.85037 0.83299 0.82597 | ||
| 4221 0 1 1 1 0 MEN1 0.0078018 0.83827 0.81897 0.82133 | ||
| 4221 1 1 1 1 1 MEN1 0.0078018 0.85458 0.83504 0.81452 | ||
| 4221 1 1 0 1 1 MEN1 0.0078018 0.8574 0.8345 0.81433 | ||
| 4221 0 1 0 1 1 MEN1 0.0078018 0.84544 0.82366 0.81255 | ||
| 4221 0 1 1 1 1 MEN1 0.0078018 0.854 0.82502 0.81146 | ||
| 4221 1 0 0 1 1 MEN1 0.0078018 0.85072 0.83205 0.80979 | ||
| 4221 1 0 1 1 1 MEN1 0.0078018 0.85552 0.8339 0.8087 | ||
| 4221 1 0 1 1 0 MEN1 0.0078018 0.85487 0.833 0.80781 | ||
| 4221 0 0 0 1 0 MEN1 0.0078018 0.75727 0.72028 0.78562 | ||
| 4221 0 0 0 1 1 MEN1 0.0078018 0.76606 0.73202 0.77289 | ||
| 4221 0 0 1 1 0 MEN1 0.0078018 0.75744 0.72204 0.76115 | ||
| 4221 0 0 1 1 1 MEN1 0.0078018 0.76603 0.71694 0.7428 | ||
| 4221 1 0 1 0 0 MEN1 0.0078018 0.72826 0.76812 0.69307 | ||
| 4221 0 1 0 0 1 MEN1 0.0078018 0.78894 0.75859 0.6837 | ||
| 4221 0 1 1 0 0 MEN1 0.0078018 0.70709 0.71926 0.63398 | ||
| 4221 1 1 0 0 1 MEN1 0.0078018 0.75274 0.76115 0.62007 | ||
| 4221 1 1 1 0 1 MEN1 0.0078018 0.74922 0.76524 0.60902 | ||
| 4221 1 0 0 0 0 MEN1 0.0078018 0.72857 0.73738 0.60616 | ||
| 4221 1 1 1 0 0 MEN1 0.0078018 0.72861 0.73261 0.59136 | ||
| 4221 1 0 0 0 1 MEN1 0.0078018 0.75487 0.74982 0.57616 | ||
| 4221 1 1 0 0 0 MEN1 0.0078018 0.72307 0.69823 0.56719 | ||
| 4221 0 1 0 0 0 MEN1 0.0078018 0.71001 0.70745 0.55041 | ||
| 4221 0 1 1 0 1 MEN1 0.0078018 0.78162 0.737 0.5219 | ||
| 4221 1 0 1 0 1 MEN1 0.0078018 0.75782 0.75556 0.51944 | ||
| 4221 0 0 1 0 0 MEN1 0.0078018 0.59436 0.53765 0.47178 | ||
| 4221 0 0 0 0 1 MEN1 0.0078018 0.63918 0.60479 0.41604 | ||
| 4221 0 0 1 0 1 MEN1 0.0078018 0.64165 0.61631 0.41298 | ||
| 5979 0 1 1 1 0 RET 0.016014 0.84825 0.82611 0.88778 | ||
| 5979 0 1 0 1 0 RET 0.016014 0.84804 0.82584 0.88767 | ||
| 5979 0 1 0 1 1 RET 0.016014 0.84551 0.82589 0.88767 | ||
| 5979 0 1 1 1 1 RET 0.016014 0.84586 0.82639 0.88767 | ||
| 5979 0 0 0 1 1 RET 0.016014 0.80154 0.78132 0.88467 | ||
| 5979 0 0 1 1 0 RET 0.016014 0.79772 0.78132 0.88467 | ||
| 5979 0 0 1 1 1 RET 0.016014 0.80119 0.78036 0.88097 | ||
| 5979 1 1 1 1 0 RET 0.016014 0.84965 0.83005 0.87626 | ||
| 5979 1 1 1 1 1 RET 0.016014 0.84671 0.83035 0.87594 | ||
| 5979 1 0 1 1 0 RET 0.016014 0.84605 0.82659 0.8709 | ||
| 5979 1 0 0 1 0 RET 0.016014 0.84601 0.82627 0.87079 | ||
| 5979 1 0 0 1 1 RET 0.016014 0.84289 0.82633 0.87079 | ||
| 5979 1 0 1 1 1 RET 0.016014 0.8433 0.82669 0.87079 | ||
| 5979 1 1 0 1 0 RET 0.016014 0.8476 0.82988 0.87037 | ||
| 5979 1 1 0 1 1 RET 0.016014 0.84665 0.82979 0.87037 | ||
| 5979 0 1 0 0 1 RET 0.016014 0.72391 0.74649 0.78996 | ||
| 5979 0 1 0 0 0 RET 0.016014 0.73719 0.75251 0.78278 | ||
| 5979 0 1 1 0 1 RET 0.016014 0.72498 0.75247 0.78027 | ||
| 5979 0 1 1 0 0 RET 0.016014 0.73027 0.75576 0.77834 | ||
| 5979 1 0 0 0 1 RET 0.016014 0.72909 0.75378 0.76387 | ||
| 5979 1 1 0 0 0 RET 0.016014 0.74045 0.76007 0.76253 | ||
| 5979 1 1 0 0 1 RET 0.016014 0.72952 0.75645 0.75777 | ||
| 5979 1 0 1 0 1 RET 0.016014 0.72807 0.76008 0.75198 | ||
| 5979 1 1 1 0 1 RET 0.016014 0.72902 0.75858 0.74963 | ||
| 5979 1 0 0 0 0 RET 0.016014 0.73982 0.76069 0.74936 | ||
| 5979 1 1 1 0 0 RET 0.016014 0.74002 0.75906 0.74325 | ||
| 5979 1 0 1 0 0 RET 0.016014 0.73368 0.76267 0.74229 | ||
| 5979 0 0 1 0 1 RET 0.016014 0.57853 0.54692 0.58501 | ||
| 5979 0 0 0 0 1 RET 0.016014 0.55554 0.52569 0.54398 | ||
| 5979 0 0 1 0 0 RET 0.016014 0.56051 0.46443 0.45082 | ||
| 5979 0 0 0 1 0 RET 0.016014 0.79629 0.21868 0.11533 | ||
| 7157 1 1 0 1 0 TP53 0.35409 0.84786 0.84534 0.85651 | ||
| 7157 1 1 0 1 1 TP53 0.35409 0.84806 0.84484 0.85651 | ||
| 7157 1 1 1 1 1 TP53 0.35409 0.84774 0.84489 0.85644 | ||
| 7157 1 1 1 1 0 TP53 0.35409 0.8475 0.84537 0.85627 | ||
| 7157 1 0 1 1 0 TP53 0.35409 0.84783 0.84529 0.85374 | ||
| 7157 1 0 0 1 1 TP53 0.35409 0.84739 0.84391 0.85014 | ||
| 7157 1 0 1 1 1 TP53 0.35409 0.84744 0.84322 0.85006 | ||
| 7157 1 1 1 0 1 TP53 0.35409 0.82911 0.82597 0.84982 | ||
| 7157 0 1 0 1 0 TP53 0.35409 0.84504 0.84027 0.84954 | ||
| 7157 1 0 0 1 0 TP53 0.35409 0.84783 0.84421 0.84908 | ||
| 7157 1 1 0 0 1 TP53 0.35409 0.82826 0.82576 0.84874 | ||
| 7157 0 1 0 1 1 TP53 0.35409 0.84511 0.83979 0.84788 | ||
| 7157 0 1 1 1 0 TP53 0.35409 0.84507 0.83896 0.84765 | ||
| 7157 1 0 1 0 1 TP53 0.35409 0.83044 0.82512 0.84753 | ||
| 7157 0 1 1 1 1 TP53 0.35409 0.84513 0.83901 0.84744 | ||
| 7157 1 1 1 0 0 TP53 0.35409 0.82923 0.82674 0.84737 | ||
| 7157 1 0 0 0 1 TP53 0.35409 0.83008 0.82507 0.84703 | ||
| 7157 1 0 1 0 0 TP53 0.35409 0.83034 0.82702 0.84611 | ||
| 7157 0 1 1 0 1 TP53 0.35409 0.8271 0.82209 0.84578 | ||
| 7157 0 1 0 0 1 TP53 0.35409 0.82692 0.82182 0.84554 | ||
| 7157 0 1 1 0 0 TP53 0.35409 0.82799 0.82325 0.84532 | ||
| 7157 1 0 0 0 0 TP53 0.35409 0.82831 0.82592 0.8439 | ||
| 7157 1 1 0 0 0 TP53 0.35409 0.82758 0.82536 0.84369 | ||
| 7157 0 1 0 0 0 TP53 0.35409 0.82558 0.82191 0.84312 | ||
| 7157 0 0 1 1 0 TP53 0.35409 0.72269 0.72046 0.73622 | ||
| 7157 0 0 1 1 1 TP53 0.35409 0.72909 0.72524 0.73554 | ||
| 7157 0 0 0 1 1 TP53 0.35409 0.72904 0.72525 0.73546 | ||
| 7157 0 0 0 1 0 TP53 0.35409 0.72255 0.71984 0.73498 | ||
| 7157 0 0 0 0 1 TP53 0.35409 0.57634 0.57419 0.58941 | ||
| 7157 0 0 1 0 1 TP53 0.35409 0.59265 0.58341 0.58714 | ||
| 7157 0 0 1 0 0 TP53 0.35409 0.53082 0.48264 0.4987 | ||
| 7428 1 0 0 1 0 VHL 0.018478 0.98297 0.98363 0.99392 | ||
| 7428 1 1 0 1 0 VHL 0.018478 0.98464 0.98335 0.99392 | ||
| 7428 1 1 0 1 1 VHL 0.018478 0.98284 0.98095 0.99392 | ||
| 7428 1 1 1 1 0 VHL 0.018478 0.98556 0.98297 0.99392 | ||
| 7428 1 1 1 1 1 VHL 0.018478 0.98436 0.98306 0.99388 | ||
| 7428 1 0 0 1 1 VHL 0.018478 0.98075 0.98375 0.99375 | ||
| 7428 1 1 0 0 1 VHL 0.018478 0.98036 0.98134 0.99318 | ||
| 7428 1 0 0 0 1 VHL 0.018478 0.974 0.98134 0.99318 | ||
| 7428 1 0 1 1 0 VHL 0.018478 0.98078 0.98287 0.99305 | ||
| 7428 1 0 1 1 1 VHL 0.018478 0.98097 0.98297 0.99301 | ||
| 7428 1 0 1 0 1 VHL 0.018478 0.97814 0.98014 0.99161 | ||
| 7428 1 1 0 0 0 VHL 0.018478 0.98076 0.97964 0.99161 | ||
| 7428 1 0 1 0 0 VHL 0.018478 0.97937 0.96852 0.99126 | ||
| 7428 1 1 1 0 0 VHL 0.018478 0.98076 0.97868 0.99126 | ||
| 7428 1 1 1 0 1 VHL 0.018478 0.9796 0.97852 0.99047 | ||
| 7428 0 1 0 1 1 VHL 0.018478 0.97458 0.97149 0.98488 | ||
| 7428 0 1 1 1 1 VHL 0.018478 0.97516 0.97063 0.98217 | ||
| 7428 0 1 0 1 0 VHL 0.018478 0.9757 0.97078 0.98212 | ||
| 7428 0 1 0 0 1 VHL 0.018478 0.97056 0.96755 0.98204 | ||
| 7428 0 1 1 0 1 VHL 0.018478 0.97085 0.96782 0.98081 | ||
| 7428 0 1 1 1 0 VHL 0.018478 0.97554 0.96966 0.9795 | ||
| 7428 0 1 0 0 0 VHL 0.018478 0.96924 0.9652 0.97552 | ||
| 7428 0 1 1 0 0 VHL 0.018478 0.97062 0.96434 0.97264 | ||
| 7428 1 0 0 0 0 VHL 0.018478 0.97722 0.91939 0.92727 | ||
| 7428 0 0 1 1 0 VHL 0.018478 0.6471 0.60612 0.59161 | ||
| 7428 0 0 0 1 0 VHL 0.018478 0.60565 0.57224 0.58099 | ||
| 7428 0 0 1 0 0 VHL 0.018478 0.61571 0.57833 0.55656 | ||
| 7428 0 0 1 1 1 VHL 0.018478 0.65996 0.61086 0.54301 | ||
| 7428 0 0 1 0 1 VHL 0.018478 0.63026 0.58997 0.52146 | ||
| 7428 0 0 0 1 1 VHL 0.018478 0.62362 0.58426 0.50175 | ||
| 7428 0 0 0 0 1 VHL 0.018478 0.54628 0.52655 0.43684 |
Oops, something went wrong.