Update Comunica monorepo packages to v3 (major)

[renovate]

This PR contains the following updates:

Package	Change	Age	Adoption	Passing	Confidence
@comunica/actor-init-query (source)	^2.4.3 -> ^3.0.0
@comunica/bus-query-operation (source)	^2.4.0 -> ^3.0.0
@comunica/config-query-sparql (source)	^2.2.0 -> ^3.0.0
@comunica/context-entries (source)	^2.4.0 -> ^3.0.0
@comunica/core (source)	^2.2.0 -> ^3.0.0
@comunica/core (source)	^2.4.0 -> ^3.0.0
@comunica/jest (source)	^2.4.0 -> ^3.0.0
@comunica/query-sparql (source)	^2.4.3 -> ^3.0.0
@comunica/runner-cli (source)	^2.4.0 -> ^3.0.0

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Release Notes

comunica/comunica (@​comunica/actor-init-query)

v3.2.1

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Added

• Add support for deduplication of results in construct queries

Changed

• Remove projection variables missing warning
• Migrate parse-link-header to http-link-header
• Migrate stream-to-string and streamify-string
• Performance improvements:
  • Tweak default BindJoin.minMaxCardinalityRatio value for WatDiv-C1
  • Use Bind Join only if smallest much smaller than largest
  • Assign smallest stream as build side in Hash Join, #​884
  • Force NLJ when join entries have no overlapping variables

Fixed

• Fix optimizer incorrectly considering some optionals empty
• Fix SLICE actor not working with ASK queries, Closes #​1374
• Make projection variables missing error a warning instead
• Fix some unions in federated queries being pruned incorrectly, Closes #​1397
• Avoid single-entry joins in join-connected optimizer, #​1397
• Consider unions when determining if operation can produce undefs, #​1406
• Fix undefined values from SPARQL endpoints being produced
• Fix unnecessary join being created when binding over filter
• Fix initialBindings failing when done over projected variables

v3.2.0

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Added

• Performance improvements:
  • Add optional hash join actor
• Add actors for bindings source attribution
• Add OPT+ operator

Changed

• Performance improvements:
  • Lower default ioWeight to tweak overall performance
  • Make optional hash and bind join only work with common variables
• Debugging and performance tracking:
  • Omit undefined join coefficients in debug logger
  • Emit timings and actual cardinalities in physical explain output
  • Make physical query plan explain output compact and human-readable
  • Compact Bind-Join operations in physical query explain output
  • Add BJ bindOperation to physical query explain output
  • Emit pattern source in physical query explain output

Fixed

• Fix undef sanity check for SPARQL endpoints sometimes going rogue
• Fix CONSTRUCT FROM not being sent to endpoints, Closes #​1389
• Fix empty media type not falling back to extension handling
• Fixed the order of count operations influencing the result
• Fix minus-hash using incorrect hash function

v3.1.0

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Added

• Add @​comunica/query-sparql-rdfjs-lite that is optimized for bundle size

Changed

• Migrate from readable-web-to-node-stream to readable-from-web
• Move validateHttpResponse helper to avoid interdependencies

Fixed

• Avoid race conditions during DELETE/INSERT operations
• Catch 404 of non-existing resource when fetching the selector shape (#​1324)
• Always add preprocessed context to unidentified query sources (#​1337)

v3.0.3

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Changed

• Add generic type to LinkQueueWrapper (#​1322)

Fixed

• Fix broken LIMITs on CONSTRUCT queries on SPARQL endpoints, Closes #​1319

v3.0.1

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BREAKING CHANGES

• Rename sparqlee-specific package names
  • @comunica/actor-query-operation-filter-sparqlee -> @comunica/actor-query-operation-filter
  • @comunica/actor-query-operation-orderby-sparqlee -> @comunica/actor-query-operation-orderby
• Generalize sources to accept all query operations
  • The rdf-resolve-quad-pattern bus has been removed in favor of the new query-source-identify bus. This bus enables identification of IQuerySource's which can accept any kind of query operation, not just quad patterns like before.
  • brTPF support is added.
  • Bound joins are supported: pushing bindings into sources (FedX)
  • Several context-preprocess actors are added due to this, which offer:
    • Grouping operations into sources during federated querying (FedX)
    • Pushing down filters into sources
    • Skolemization of blank nodes
• Move sequential query process steps to separate bus and actor
• Move context shortcut handling to preprocess actor

Added

• Allow Bindings to have contexts
• Add timeout for sparql endpoint count queries
• Process source contexts to support shortcuts
• Add option to disable caching (#​1297)
• Allow sources to be annotated with traverse flag

Fixed

• Fix GROUP_CONCAT losing languages if equal

Changed

• Update to asynciterator 3.9.0 to make results async iterable
• Ensure QueryEngine instances are fully independent
• Update to Components.js v6

v2.10.2

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Fixed

• Migrate to @​smessie/readable-web-to-node-stream

v2.10.1

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Fixed

• Fix updates with body streams failing in Node >= 18
• Generalize fromBindings in BindingsFactory

v2.10.0

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Added

• Convert raw source contexts to ActionContexts
• Support relative and absolute paths for COMUNICA_CONFIG

Changed

• Log expression error messages
• Print log levels in different colors
• Update readable-stream, yargs, lerna, typescript and eslint (#​1271)

Fixed

• Fix wrong cardinality for zero-or-one paths with one variable
• Support building with esModuleInterop TS flag
• Skip calling endsWith on mediaType when mediaType is undefined

v2.9.0

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Changed

• Early close/destroy in hypermedia iterator when aggregatedStore is unused
• Update dependency uuid to v9 (#​1247)
• Migrate sparqlee into Comunica

Fixed

• Enable SPARQL-star for update queries to endpoints

v2.8.2

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Fixed

• Fix aggregated store not containing first source after query re-exec

v2.8.1

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Fixed

• Allow multi join actors to handle undefs, Closes #​1231
• Fix process halting on many TPF sources

v2.8.0

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Added

• Add support for RDF-star and SPARQL-star
  • Support quoted triples in result serializers
  • Add support for processing quoted triples

Changed

• Update to rdf-store-stream v2
• Update dependency lru-cache to v10
• Update to TypeScript 5.x

v2.7.1

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Changed

• Update dependency htmlparser2 to v9 (#​1211)
• Simplify stringSource actor implementation

Fixed

• Fix existence hook not provided error with OPTIONAL, Closes #​1029
• Fix stringSource syntax errors not being caught, Closes #​1192
• Fix bind join illegally being used over FILTERs
• Fix NaN selectivity for non-pattern operations

v2.7.0

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Added

• Support durations, dates, and times in filters
• Add support for ZeroOrOne path expressions with 2 variables

Changed

• Improving Web support
  • Use process shim (#​1186)
• Improve performance with SPARQL endpoints
  • Improve metadata and lazyness in SPARQL hypermedia actor
  • Fix SPARQL endpoint operator always having canContainUndefs: true
  • Fix keepalive not being true in fetch-only environments
  • Cache count queries over SPARQL endpoints
• Enable incremental metadata updates
• Update dependency canonicalize to v2
• Make Bindings#merge and mergeWith accept more generic RDF.Bindings

Fixed

• Fix blank node scoping in CONSTRUCT queries, Closes #​1190
• Add missing baseIRI for shaclc
• Destroy unused iterators

v2.6.9

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Changed

• Update to Node.js typings v18

Fixed

• Bump rdf-streaming-store with another fix for stream.push() after EOF
• Use globalThis instead of global
• Fix OPTIONAL failing to emit FILTERed results

v2.6.8

Compare Source

Changed

• Remove deprecated calls to lru-cache

Fixed

• Bump rdf-streaming-store with fix for stream.push() after EOF
• Fix aggregated store not ending when linked iterator is destroyed
• Scope aggregated stores in the query context

v2.6.7

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Added

• Allow minimum sources check on CLI to be disabled
• Allow generic context type in QueryEngine to omit fields

v2.6.0

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Added

• Add SHACLC parser and serializer
• Allow hypermedia actor to aggregate link queue in an index

Changed

• Use sparqlee's new type system

Fixed

• Fix invalid baseIRI when querying local files
• Fix errors in Node 19

v2.5.1

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Fixed

• Add missing dependencies in file and rdfjs engines
• Rename wayback actor in config, Closes #​1086
• Add localizeBlankNodes to IQueryContextCommon
• Fix incorrect files entry in data-factory
• Add recoverBrokenLinks to IQueryContextCommon

v2.5.0

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Added

• Enable engines to override context shortcuts and typings
• Support string-based data sources, Closes #​639
• Add support for HTTP retries
• Add wayback HTTP actor

Changed

• Add USER to Dockerfile
• Make QueryOperationAsk close the BindingsStream earlier
• Expose localizeBlankNodes on the CLI

Fixed

• Bump to asynciterator 3.8 with ESM packaging fix, Closes #​1097
• Include source map files in packed files
• Fix invalid blank node skolemization in DESCRIBE queries

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