Fix corrupted package cache for outputs in subpackage tests

conda_build/build.py

@@ -38,6 +38,7 @@
     env_path_backup_var_exists,
     get_conda_channel,
     get_rc_urls,
+    pkgs_dirs,
     prefix_placeholder,
     reset_context,
     root_dir,
@@ -3394,6 +3395,25 @@ def test(
     #     folder destination
     _extract_test_files_from_package(metadata)
 
+    # Remove any previously cached build from the package cache to ensure we
+    # really test the requested build and not some clashing or corrupted build.
+    # (Corruption of the extracted package can happen, e.g., in multi-output
+    # builds if one of the subpackages overwrites files from the other.)
+    # Special case:
+    #   If test is requested for .tar.bz2/.conda file from the pkgs dir itself,
+    #   clean_pkg_cache() will remove it; don't call that function in this case.
+    in_pkg_cache = (
+        not hasattr(recipedir_or_package_or_metadata, "config")
+        and os.path.isfile(recipedir_or_package_or_metadata)
+        and recipedir_or_package_or_metadata.endswith(CONDA_PACKAGE_EXTENSIONS)
+        and any(
+            os.path.dirname(recipedir_or_package_or_metadata) in pkgs_dir
+            for pkgs_dir in pkgs_dirs
+        )
+    )
+    if not in_pkg_cache:
+        environ.clean_pkg_cache(metadata.dist(), metadata.config)
+
     copy_test_source_files(metadata, metadata.config.test_dir)
     # this is also copying tests/source_files from work_dir to testing workdir
 

conda_build/environ.py

@@ -16,10 +16,15 @@
 from logging import getLogger
 from os.path import join, normpath
 
-from conda.base.constants import DEFAULTS_CHANNEL_NAME, UNKNOWN_CHANNEL
+from conda.base.constants import (
+    CONDA_PACKAGE_EXTENSIONS,
+    DEFAULTS_CHANNEL_NAME,
+    UNKNOWN_CHANNEL,
+)
 from conda.common.io import env_vars
 from conda.core.index import LAST_CHANNEL_URLS
 from conda.core.link import PrefixSetup, UnlinkLinkTransaction
+from conda.core.package_cache_data import PackageCacheData
 from conda.core.prefix_data import PrefixData
 from conda.models.channel import prioritize_channels
 
@@ -43,6 +48,7 @@
     reset_context,
     root_dir,
 )
+from .config import Config
 from .deprecations import deprecated
 from .exceptions import BuildLockError, DependencyNeedsBuildingError
 from .features import feature_list
@@ -1264,6 +1270,29 @@ def get_pkg_dirs_locks(dirs, config):
     return [utils.get_lock(folder, timeout=config.timeout) for folder in dirs]
 
 
+def clean_pkg_cache(dist: str, config: Config) -> None:
+    with utils.LoggingContext(logging.DEBUG if config.debug else logging.WARN):
+        locks = get_pkg_dirs_locks([config.bldpkgs_dir] + pkgs_dirs, config)
+        with utils.try_acquire_locks(locks, timeout=config.timeout):
+            for pkgs_dir in pkgs_dirs:
+                if any(
+                    os.path.exists(os.path.join(pkgs_dir, f"{dist}{ext}"))
+                    for ext in ("", *CONDA_PACKAGE_EXTENSIONS)
+                ):
+                    log.debug(
+                        "Conda caching error: %s package remains in cache after removal",
+                        dist,
+                    )
+                    log.debug("manually removing to compensate")
+                    package_cache = PackageCacheData.first_writable([pkgs_dir])
+                    for cache_pkg_id in package_cache.query(dist):
+                        package_cache.remove(cache_pkg_id)
+
+        # Note that this call acquires the relevant locks, so this must be called
+        # outside the lock context above.
+        remove_existing_packages(pkgs_dirs, [dist], config)
+
+
 def remove_existing_packages(dirs, fns, config):
     locks = get_pkg_dirs_locks(dirs, config) if config.locking else []
 

news/5184-fix-multi-output-package-corruption

@@ -0,0 +1,19 @@
+### Enhancements
+
+* <news item>
+
+### Bug fixes
+
+* Fix corrupted package cache for outputs in subpackage tests. (#5184)
+
+### Deprecations
+
+* <news item>
+
+### Docs
+
+* <news item>
+
+### Other
+
+* <news item>

tests/test-recipes/metadata/outputs_overwrite_base_file/install.bat

@@ -0,0 +1,2 @@
+:: Always output 4 characters to properly test even if "SafetyError: ... incorrect size." is not triggered.
+< nul set /p="%PKG_NAME:~0,4%" > "%PREFIX%\file" & call;

tests/test-recipes/metadata/outputs_overwrite_base_file/install.sh

@@ -0,0 +1,2 @@
+## Always output 4 characters to properly test even if "SafetyError: ... incorrect size." is not triggered.
+printf '%.4s' "${PKG_NAME}" > "${PREFIX}/file"

tests/test-recipes/metadata/outputs_overwrite_base_file/meta.yaml

@@ -0,0 +1,40 @@
+{% set name = "outputs_overwrite_base_file" %}
+
+package:
+  name: {{ name }}
+  version: 1.0
+
+outputs:
+  - name: base-{{ name }}
+    script: install.sh  # [unix]
+    script: install.bat  # [win]
+
+  - name: first-{{ name }}
+    script: install.sh  # [unix]
+    script: install.bat  # [win]
+    requirements:
+      host:
+        - {{ pin_subpackage("base-" + name) }}
+      run:
+        - {{ pin_subpackage("base-" + name) }}
+    test:
+      commands:
+        - content="$(cat "${PREFIX}/file")"  # [unix]
+        - test "${content}" = base  # [unix]
+        - < "%PREFIX%\file%" set /p content=  # [win]
+        - if not "%content%" == "base" exit 1  # [win]
+
+  - name: second-{{ name }}
+    script: install.sh  # [unix]
+    script: install.bat  # [win]
+    requirements:
+      host:
+        - {{ pin_subpackage("base-" + name) }}
+      run:
+        - {{ pin_subpackage("base-" + name) }}
+    test:
+      commands:
+        - content="$(cat "${PREFIX}/file")"  # [unix]
+        - test "${content}" = "base"  # [unix]
+        - < "%PREFIX%\file%" set /p content=  # [win]
+        - if not "%content%" == "base" exit 1  # [win]