Merge remote-tracking branch 'origin/main' into itk-interpolation-2

.circleci/config.yml

@@ -5,7 +5,7 @@ defaults: &defaults
   working_directory: ~/repo
   # https://circleci.com/docs/2.0/circleci-images/#language-image-variants
   docker:
-    - image: cimg/node:18.19.0-browsers
+    - image: cimg/node:20.18.1-browsers
       environment:
         TERM: xterm # Enable colors in term
 

.eslintignore

@@ -3,3 +3,4 @@
 *.json
 packages/adapters/config/webpack/*.js
 packages/docs/*.js
+packages/tools/src/utilities/segmentation/growCut/runGrowCut.ts

.github/workflows/playwright.yml

@@ -22,7 +22,7 @@ jobs:
       - uses: actions/checkout@v4
       - uses: actions/setup-node@v4
         with:
-          node-version: 18
+          node-version: 20
       - name: Install dependencies
         run: bun install --frozen-lockfile
       - name: Run Playwright tests
@@ -46,7 +46,7 @@ jobs:
       - uses: actions/checkout@v4
       - uses: actions/setup-node@v4
         with:
-          node-version: 18
+          node-version: 20
       - name: Install dependencies
         run: bun install --frozen-lockfile
       - name: Download blob reports from GitHub Actions Artifacts

.vscode/extensions.json

@@ -1,3 +1,3 @@
 {
-  "recommendations": ["esbenp.prettier-vscode", "dbaeumer.vscode-eslint"]
+  "recommendations": ["esbenp.prettier-vscode", "dbaeumer.vscode-eslint", "PolyMeilex.wgsl"]
 }

CHANGELOG.md

@@ -3,6 +3,226 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
 
+## [2.14.2](https://github.com/cornerstonejs/cornerstone3D/compare/v2.14.1...v2.14.2) (2024-12-20)
+
+### Bug Fixes
+
+- **voi:** convert voi to an object before setting a property ([#1723](https://github.com/cornerstonejs/cornerstone3D/issues/1723)) ([7eaea78](https://github.com/cornerstonejs/cornerstone3D/commit/7eaea78d8755165bec50a5df7f64ed2f610a642b))
+
+## [2.14.1](https://github.com/cornerstonejs/cornerstone3D/compare/v2.14.0...v2.14.1) (2024-12-20)
+
+**Note:** Version bump only for package root
+
+# [2.14.0](https://github.com/cornerstonejs/cornerstone3D/compare/v2.13.0...v2.14.0) (2024-12-20)
+
+### Features
+
+- **probe:** isPointNearTool for probe tool, and use line width from config ([#1721](https://github.com/cornerstonejs/cornerstone3D/issues/1721)) ([90c1a98](https://github.com/cornerstonejs/cornerstone3D/commit/90c1a98965584df7154cb39b43f60ae187f5e399))
+
+# [2.13.0](https://github.com/cornerstonejs/cornerstone3D/compare/v2.12.3...v2.13.0) (2024-12-20)
+
+### Features
+
+- **voi:** add linear exact voi lut function ([#1717](https://github.com/cornerstonejs/cornerstone3D/issues/1717)) ([faf3b9d](https://github.com/cornerstonejs/cornerstone3D/commit/faf3b9ded5dc42ef9fdd6d2f36aecb1e56cefeb7))
+
+## [2.12.3](https://github.com/cornerstonejs/cornerstone3D/compare/v2.12.2...v2.12.3) (2024-12-18)
+
+### Bug Fixes
+
+- passing metadata to getTextLines callback in annotation tools ([#1710](https://github.com/cornerstonejs/cornerstone3D/issues/1710)) ([67618fa](https://github.com/cornerstonejs/cornerstone3D/commit/67618fad3e1ea8c7458b0dea0d9cc4f32a8de203))
+
+## [2.12.2](https://github.com/cornerstonejs/cornerstone3D/compare/v2.12.1...v2.12.2) (2024-12-18)
+
+**Note:** Version bump only for package root
+
+## [2.12.1](https://github.com/cornerstonejs/cornerstone3D/compare/v2.12.0...v2.12.1) (2024-12-18)
+
+**Note:** Version bump only for package root
+
+# [2.12.0](https://github.com/cornerstonejs/cornerstone3D/compare/v2.11.7...v2.12.0) (2024-12-16)
+
+### Features
+
+- **adapters:** default to creation of labelmap images in 2D instead of a volume ([#1692](https://github.com/cornerstonejs/cornerstone3D/issues/1692)) ([960b75a](https://github.com/cornerstonejs/cornerstone3D/commit/960b75a2ebed3a141ceefcf4f38fb6de388a4ca0))
+
+## [2.11.7](https://github.com/cornerstonejs/cornerstone3D/compare/v2.11.6...v2.11.7) (2024-12-13)
+
+### Bug Fixes
+
+- **nifti-loader:** Add custom header support to nifti loader to support auth headers or any custom headers ([#1708](https://github.com/cornerstonejs/cornerstone3D/issues/1708)) ([182e369](https://github.com/cornerstonejs/cornerstone3D/commit/182e369d202035db4acb7757360d919532320042))
+
+## [2.11.6](https://github.com/cornerstonejs/cornerstone3D/compare/v2.11.5...v2.11.6) (2024-12-12)
+
+### Bug Fixes
+
+- **segmentation:** fix segmentation for video viewports ([#1595](https://github.com/cornerstonejs/cornerstone3D/issues/1595)) ([4056d98](https://github.com/cornerstonejs/cornerstone3D/commit/4056d983e0a2f142196f8336222fc6b1f121863e))
+
+## [2.11.5](https://github.com/cornerstonejs/cornerstone3D/compare/v2.11.4...v2.11.5) (2024-12-12)
+
+### Bug Fixes
+
+- **utilities/math:** export circle math utilities ([#1703](https://github.com/cornerstonejs/cornerstone3D/issues/1703)) ([1a7b7d6](https://github.com/cornerstonejs/cornerstone3D/commit/1a7b7d6ba83e0647afdd0f92a367bedecbad3295))
+
+## [2.11.4](https://github.com/cornerstonejs/cornerstone3D/compare/v2.11.3...v2.11.4) (2024-12-12)
+
+### Bug Fixes
+
+- nifti 8 bit ([#1706](https://github.com/cornerstonejs/cornerstone3D/issues/1706)) ([7579285](https://github.com/cornerstonejs/cornerstone3D/commit/757928586febc21a432c04019b85df9ee274dc8e))
+
+## [2.11.3](https://github.com/cornerstonejs/cornerstone3D/compare/v2.11.2...v2.11.3) (2024-12-12)
+
+### Bug Fixes
+
+- **types:** type fixes ([#1638](https://github.com/cornerstonejs/cornerstone3D/issues/1638)) ([87626a5](https://github.com/cornerstonejs/cornerstone3D/commit/87626a5e9df3db493396aac3820657544a96daa9))
+
+## [2.11.2](https://github.com/cornerstonejs/cornerstone3D/compare/v2.11.1...v2.11.2) (2024-12-11)
+
+### Bug Fixes
+
+- average blend mode and trackball rotate reset camera ([#1700](https://github.com/cornerstonejs/cornerstone3D/issues/1700)) ([0f3f4a0](https://github.com/cornerstonejs/cornerstone3D/commit/0f3f4a02be784d1b97afafa8da58f5cd89e7a572))
+
+## [2.11.1](https://github.com/cornerstonejs/cornerstone3D/compare/v2.11.0...v2.11.1) (2024-12-11)
+
+**Note:** Version bump only for package root
+
+# [2.11.0](https://github.com/cornerstonejs/cornerstone3D/compare/v2.10.0...v2.11.0) (2024-12-11)
+
+### Features
+
+- move to node 20 ([#1698](https://github.com/cornerstonejs/cornerstone3D/issues/1698)) ([426e912](https://github.com/cornerstonejs/cornerstone3D/commit/426e912890f3b8467f24c97f7523e6d84cb46c88))
+
+# [2.10.0](https://github.com/cornerstonejs/cornerstone3D/compare/v2.9.0...v2.10.0) (2024-12-11)
+
+### Features
+
+- **labelmap:** render properly on mip viewports ([#1693](https://github.com/cornerstonejs/cornerstone3D/issues/1693)) ([701f44c](https://github.com/cornerstonejs/cornerstone3D/commit/701f44ce34b29492a89ab8ea64088941291ee416))
+
+# [2.9.0](https://github.com/cornerstonejs/cornerstone3D/compare/v2.8.6...v2.9.0) (2024-12-09)
+
+### Features
+
+- add grow shrink to growcut tools and box prompt to sam model ([#1690](https://github.com/cornerstonejs/cornerstone3D/issues/1690)) ([c46ab42](https://github.com/cornerstonejs/cornerstone3D/commit/c46ab42b5ce299ef6e8095af12912693a5f29ce1))
+
+## [2.8.6](https://github.com/cornerstonejs/cornerstone3D/compare/v2.8.5...v2.8.6) (2024-12-09)
+
+### Bug Fixes
+
+- register ImageCPRMapper ([#1689](https://github.com/cornerstonejs/cornerstone3D/issues/1689)) ([ca62c98](https://github.com/cornerstonejs/cornerstone3D/commit/ca62c98b5b7126001f268c5607d43f99509f6c7a)), closes [#1677](https://github.com/cornerstonejs/cornerstone3D/issues/1677)
+
+## [2.8.5](https://github.com/cornerstonejs/cornerstone3D/compare/v2.8.4...v2.8.5) (2024-12-09)
+
+### Bug Fixes
+
+- **SplineROI:** prevent destructive property access when enabledElement is undefined ([#1687](https://github.com/cornerstonejs/cornerstone3D/issues/1687)) ([8a28af1](https://github.com/cornerstonejs/cornerstone3D/commit/8a28af1e23b46f1edb2f576843ac46b269353c20)), closes [#1634](https://github.com/cornerstonejs/cornerstone3D/issues/1634)
+
+## [2.8.4](https://github.com/cornerstonejs/cornerstone3D/compare/v2.8.3...v2.8.4) (2024-12-06)
+
+### Bug Fixes
+
+- **examples:** stack and volume segmentation ([#1684](https://github.com/cornerstonejs/cornerstone3D/issues/1684)) ([5149b31](https://github.com/cornerstonejs/cornerstone3D/commit/5149b31d54dca9ff8d0f24dcf8d432b6df1dd29b))
+
+## [2.8.3](https://github.com/cornerstonejs/cornerstone3D/compare/v2.8.2...v2.8.3) (2024-12-06)
+
+**Note:** Version bump only for package root
+
+## [2.8.2](https://github.com/cornerstonejs/cornerstone3D/compare/v2.8.1...v2.8.2) (2024-12-06)
+
+### Bug Fixes
+
+- **url:** logic that determines if nifti file is compressed ([#1669](https://github.com/cornerstonejs/cornerstone3D/issues/1669)) ([48e5805](https://github.com/cornerstonejs/cornerstone3D/commit/48e580577b1634d5f1b17fd66ba128a079be9471))
+
+## [2.8.1](https://github.com/cornerstonejs/cornerstone3D/compare/v2.8.0...v2.8.1) (2024-12-06)
+
+### Bug Fixes
+
+- **examples:** fix the stack and volume segmentation adapters example ([#1680](https://github.com/cornerstonejs/cornerstone3D/issues/1680)) ([85e8ca4](https://github.com/cornerstonejs/cornerstone3D/commit/85e8ca4bda0a2948565ac88c9ddd07aa2b02f2d3))
+
+# [2.8.0](https://github.com/cornerstonejs/cornerstone3D/compare/v2.7.4...v2.8.0) (2024-12-05)
+
+### Features
+
+- Add undo/redo to annotation tools and labelmaps ([#1675](https://github.com/cornerstonejs/cornerstone3D/issues/1675)) ([846d2a0](https://github.com/cornerstonejs/cornerstone3D/commit/846d2a0aa698911578f1592f8d89b6426f0bb111))
+
+## [2.7.4](https://github.com/cornerstonejs/cornerstone3D/compare/v2.7.3...v2.7.4) (2024-12-04)
+
+**Note:** Version bump only for package root
+
+## [2.7.3](https://github.com/cornerstonejs/cornerstone3D/compare/v2.7.2...v2.7.3) (2024-12-04)
+
+### Bug Fixes
+
+- **camera:** don't try to access renderer if it's undefined ([#1674](https://github.com/cornerstonejs/cornerstone3D/issues/1674)) ([6d03b17](https://github.com/cornerstonejs/cornerstone3D/commit/6d03b17c00ce961f786c25833deaeb25e4f51a10))
+
+## [2.7.2](https://github.com/cornerstonejs/cornerstone3D/compare/v2.7.1...v2.7.2) (2024-12-04)
+
+**Note:** Version bump only for package root
+
+## [2.7.1](https://github.com/cornerstonejs/cornerstone3D/compare/v2.7.0...v2.7.1) (2024-12-04)
+
+### Bug Fixes
+
+- **growcut:** memory limit issue ([#1672](https://github.com/cornerstonejs/cornerstone3D/issues/1672)) ([2516e64](https://github.com/cornerstonejs/cornerstone3D/commit/2516e642d91b8a4f3f331090c5b7609a72a56123))
+
+# [2.7.0](https://github.com/cornerstonejs/cornerstone3D/compare/v2.6.5...v2.7.0) (2024-12-04)
+
+### Features
+
+- **webgpu:** growcut base tools ([#1670](https://github.com/cornerstonejs/cornerstone3D/issues/1670)) ([7494c9e](https://github.com/cornerstonejs/cornerstone3D/commit/7494c9e683cd5d27eb9f6f71d958786381a774d5))
+
+## [2.6.5](https://github.com/cornerstonejs/cornerstone3D/compare/v2.6.4...v2.6.5) (2024-12-04)
+
+**Note:** Version bump only for package root
+
+## [2.6.4](https://github.com/cornerstonejs/cornerstone3D/compare/v2.6.3...v2.6.4) (2024-12-04)
+
+**Note:** Version bump only for package root
+
+## [2.6.3](https://github.com/cornerstonejs/cornerstone3D/compare/v2.6.2...v2.6.3) (2024-12-03)
+
+**Note:** Version bump only for package root
+
+## [2.6.2](https://github.com/cornerstonejs/cornerstone3D/compare/v2.6.1...v2.6.2) (2024-12-03)
+
+### Bug Fixes
+
+- voxelmanager getCompleteScalarData ([#1663](https://github.com/cornerstonejs/cornerstone3D/issues/1663)) ([910c963](https://github.com/cornerstonejs/cornerstone3D/commit/910c963211f477144929b8f2aa7d3250f40bbbba))
+
+## [2.6.1](https://github.com/cornerstonejs/cornerstone3D/compare/v2.6.0...v2.6.1) (2024-12-03)
+
+### Bug Fixes
+
+- **StackViewport:** Add metadata checks in methods and update example info ([#1660](https://github.com/cornerstonejs/cornerstone3D/issues/1660)) ([cf29c45](https://github.com/cornerstonejs/cornerstone3D/commit/cf29c452a6aad769eee73408dab7f81b81140094))
+
+# [2.6.0](https://github.com/cornerstonejs/cornerstone3D/compare/v2.5.3...v2.6.0) (2024-12-03)
+
+### Features
+
+- automatic segmentation using onnx to run local AI algorithms ([#1656](https://github.com/cornerstonejs/cornerstone3D/issues/1656)) ([5b5856f](https://github.com/cornerstonejs/cornerstone3D/commit/5b5856fe19eb3ac61fe7877283ed5a7f8a7fa53c))
+
+## [2.5.3](https://github.com/cornerstonejs/cornerstone3D/compare/v2.5.2...v2.5.3) (2024-12-03)
+
+### Bug Fixes
+
+- delete unused import code of resetCamera ([#1421](https://github.com/cornerstonejs/cornerstone3D/issues/1421)) ([3b968b8](https://github.com/cornerstonejs/cornerstone3D/commit/3b968b8cfc69790615a7209c43c8732a05ea76b5))
+
+## [2.5.2](https://github.com/cornerstonejs/cornerstone3D/compare/v2.5.1...v2.5.2) (2024-12-03)
+
+### Bug Fixes
+
+- triggered event type when segment rep modified ([#1652](https://github.com/cornerstonejs/cornerstone3D/issues/1652)) ([f18d550](https://github.com/cornerstonejs/cornerstone3D/commit/f18d55003c30a6bd08d3a61b5a09b3ce73a8c420))
+
+## [2.5.1](https://github.com/cornerstonejs/cornerstone3D/compare/v2.5.0...v2.5.1) (2024-12-02)
+
+### Bug Fixes
+
+- **Tools:** Update getAnnotation to use set annotation manager ([#1640](https://github.com/cornerstonejs/cornerstone3D/issues/1640)) ([5ae732b](https://github.com/cornerstonejs/cornerstone3D/commit/5ae732b06363b0bfa5db250d05dd92e06ccc53e9))
+
+# [2.5.0](https://github.com/cornerstonejs/cornerstone3D/compare/v2.4.0...v2.5.0) (2024-12-02)
+
+### Features
+
+- History api - keyboard binding api will change ([#1601](https://github.com/cornerstonejs/cornerstone3D/issues/1601)) ([4b2cb7c](https://github.com/cornerstonejs/cornerstone3D/commit/4b2cb7c99d7ce022f5e5c057156831ddc5bfef92))
+
 # [2.4.0](https://github.com/cornerstonejs/cornerstone3D/compare/v2.3.3...v2.4.0) (2024-11-29)
 
 ### Features

addOns/README.md

@@ -1,3 +1,8 @@
 # External Dependencies
 
 This module contains optional and external dependencies for including in OHIF, such as the DICOM Microscopy Viewer component.
+
+
+# External Components
+
+This directory contains various external components.  These can be fetched in various ways such as NPM dependencies or by fetching files externally.

commit.txt

@@ -1 +1 @@
-c0567c931ab8d7620cfd12dc4a74fe29a380cb2c
+7eaea78d8755165bec50a5df7f64ed2f610a642b