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Merge branch 'release/0.6.1' into main
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Naomi Braun committed May 9, 2019
2 parents f1c3bcd + c26409a commit f116c56
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11 changes: 11 additions & 0 deletions CHANGELOG
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Original file line number Diff line number Diff line change
@@ -1,5 +1,16 @@
Changelog
=========
## [0.6.1] - 2019-05-19
### Summary

Fix field names and blanks circumstances.

### Fixed
* Incorrect fields used in blanks check on D1 form (Naomi Braun, Nicolas May)
* Field names missing in blanks check on A3 form (Naomi Braun)
* Adjust builder files to use correct field names for Z1X form (Naomi Braun)


## [0.6.0] - 2019-04-17
### Summary

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21 changes: 21 additions & 0 deletions get_subject_list.js
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Original file line number Diff line number Diff line change
@@ -0,0 +1,21 @@
var statusList = document.getElementsByName('XID')[0].options;
packets = [['Patient ID','Packet type','Visit Num','Status']];
for(i=6; i < statusList.length; i++){
label = statusList[i].label.split(" ");
csv = [label[3], label[6], label[10], label[19]];
packets[i] = csv;}

var csvContent = "data:text/csv;charset=utf-8,";
packets.forEach(function(infoArray, index){

dataString = infoArray.join(",");
csvContent += index < packets.length ? dataString+ "\n" : dataString;
});

var encodedUri = encodeURI(csvContent);
a=document.createElement('a');
a.textContent='download';
a.download="current-db-subjects.csv";
a.href=csvContent;
document.body.appendChild(a);
a.click();
7 changes: 6 additions & 1 deletion nacc/redcap2nacc.py
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Expand Up @@ -163,7 +163,12 @@ def convert(fp, options, out=sys.stdout, err=sys.stderr):
set_blanks_to_zero(packet)

warnings = []
warnings += check_blanks(packet)
try:
warnings += check_blanks(packet)
except KeyError:
print >> err, "[SKIP] Error for ptid : " + str(record['ptid'])
traceback.print_exc()
continue

if not options.np:
warnings += check_single_select(packet)
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94 changes: 47 additions & 47 deletions nacc/uds3/fvp/builder.py
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Original file line number Diff line number Diff line change
Expand Up @@ -857,53 +857,53 @@ def add_z1_or_z1x(record, packet):
if (int(record['visityr'])>2018) or (int(record['visityr'])==2018 and int(record['visitmo'])>4) or \
(int(record['visityr'])==2018 and int(record['visitmo'])==4 and int(record['visitday'])>=2):
z1x = fvp_forms.FormZ1X()
z1x.LANGA1 = record['fu_a1lang']
z1x.LANGA2 = record['fu_a2lang']
z1x.A2SUB = record['fu_a2sub_73fdc7']
z1x.A2NOT = record['fu_a2not_fd65a7']
z1x.LANGA3 = record['fu_a3lang']
z1x.A3SUB = record['fu_a3sub_c2a68b']
z1x.A3NOT = record['fu_a3not_f7c411']
z1x.LANGA4 = record['fu_a4lang']
z1x.A4SUB = record['fu_a4sub_143f22']
z1x.A4NOT = record['fu_a4not_b95e64']
z1x.LANGB1 = record['fu_b1lang']
z1x.B1SUB = record['fu_b1sub_c03500']
z1x.B1NOT = record['fu_b1not_0a7e9f']
z1x.LANGB4 = record['fu_b4lang']
z1x.LANGB5 = record['fu_b5lang']
z1x.B5SUB = record['fu_b5sub_51a694']
z1x.B5NOT = record['b5not_fvpz1x']
z1x.LANGB6 = record['fu_b6lang']
z1x.B6SUB = record['fu_b6sub_db439d']
z1x.B6NOT = record['fu_b6not_310244']
z1x.LANGB7 = record['fu_b7lang']
z1x.B7SUB = record['fu_b7sub_21a95f']
z1x.B7NOT = record['fu_b7not_dccb30']
z1x.LANGB8 = record['fu_b8lang']
z1x.LANGB9 = record['fu_b9lang']
z1x.LANGC2 = record['fu_c2lang']
z1x.LANGD1 = record['fu_d1lang']
z1x.LANGD2 = record['fu_d2lang']
z1x.LANGA3A = record['fu_a3alang']
z1x.FTDA3AFS = record['fu_a3asubmitted']
z1x.FTDA3AFR = record['fu_a3anot']
z1x.LANGB3F = record['fu_b3flang']
z1x.LANGB9F = record['fu_b9flang']
z1x.LANGC1F = record['fu_c1flang']
z1x.LANGC2F = record['fu_c2flang']
z1x.LANGC3F = record['fu_c3flang']
z1x.LANGC4F = record['fu_c4flang']
z1x.FTDC4FS = record['fu_c4fsubmitted']
z1x.FTDC4FR = record['fu_c4fnot']
z1x.FTDC5FS = record['fu_c5fsubmitted']
z1x.FTDC5FR = record['fu_c5fnot']
z1x.FTDC6FS = record['fu_c6fsubmitted']
z1x.FTDC6FR = record['fu_c6fnot']
z1x.LANGE2F = record['fu_e2flang']
z1x.LANGE3F = record['fu_e3flang']
z1x.LANGCLS = record['fu_clslang']
z1x.CLSSUB = record['fu_clssubmitted']
z1x.LANGA1 = record['fu_langa1']
z1x.LANGA2 = record['fu_langa2']
z1x.A2SUB = record['fu_a2sub']
z1x.A2NOT = record['fu_a2not']
z1x.LANGA3 = record['fu_langa3']
z1x.A3SUB = record['fu_a3sub']
z1x.A3NOT = record['fu_a3not']
z1x.LANGA4 = record['fu_langa4']
z1x.A4SUB = record['fu_a4sub']
z1x.A4NOT = record['fu_a4not']
z1x.LANGB1 = record['fu_langb1']
z1x.B1SUB = record['fu_b1sub']
z1x.B1NOT = record['fu_b1not']
z1x.LANGB4 = record['fu_langb4']
z1x.LANGB5 = record['fu_langb5']
z1x.B5SUB = record['fu_b5sub']
z1x.B5NOT = record['fu_b5not']
z1x.LANGB6 = record['fu_langb6']
z1x.B6SUB = record['fu_b6sub']
z1x.B6NOT = record['fu_b6not']
z1x.LANGB7 = record['fu_langb7']
z1x.B7SUB = record['fu_b7sub']
z1x.B7NOT = record['fu_b7not']
z1x.LANGB8 = record['fu_langb8']
z1x.LANGB9 = record['fu_langb9']
z1x.LANGC2 = record['fu_langc2']
z1x.LANGD1 = record['fu_langd1']
z1x.LANGD2 = record['fu_langd2']
z1x.LANGA3A = record['fu_langa3a']
z1x.FTDA3AFS = record['fu_ftda3afs']
z1x.FTDA3AFR = record['fu_ftda3afr']
z1x.LANGB3F = record['fu_langb3f']
z1x.LANGB9F = record['fu_langb9f']
z1x.LANGC1F = record['fu_langc1f']
z1x.LANGC2F = record['fu_langc2f']
z1x.LANGC3F = record['fu_langc3f']
z1x.LANGC4F = record['fu_langc4f']
z1x.FTDC4FS = record['fu_ftdc4fs']
z1x.FTDC4FR = record['fu_ftdc4fr']
z1x.FTDC5FS = record['fu_ftdc5fs']
z1x.FTDC5FR = record['fu_ftdc5fr']
z1x.FTDC6FS = record['fu_ftdc6fs']
z1x.FTDC6FR = record['fu_ftdc6fr']
z1x.LANGE2F = record['fu_lange2f']
z1x.LANGE3F = record['fu_lange3f']
z1x.LANGCLS = record['fu_langcls']
z1x.CLSSUB = record['fu_clssub']
packet.insert(0, z1x)
else:
z1 = fvp_forms.FormZ1()
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20 changes: 10 additions & 10 deletions nacc/uds3/fvp/forms.py
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Expand Up @@ -74,8 +74,8 @@ def __init__(self):
self.fields['NWINFMUT'] = nacc.uds3.Field(name='NWINFMUT', typename='Num', position=(45, 45), length=1, inclusive_range=(0, 1), allowable_values=['9', '1', '0'], blanks=[])
self.fields['FADMUT'] = nacc.uds3.Field(name='FADMUT', typename='Num', position=(47, 47), length=1, inclusive_range=(0, 3), allowable_values=['2', '1', '0', '9', '8', '3'], blanks=['Blank if Question 1 NWINFMUT ne 1 (Yes)'])
self.fields['FADMUTX'] = nacc.uds3.Field(name='FADMUTX', typename='Char', position=(49, 108), length=60, inclusive_range=None, allowable_values=[], blanks=['Blank if Question 2a FADMUT ne 8 (Other)', 'Blank if Question 1 NWINFMUT ne 1 (Yes)'])
self.fields['FADMUSO'] = nacc.uds3.Field(name='FADMUSO', typename='Num', position=(110, 110), length=1, inclusive_range=(1, 3), allowable_values=['3', '2', '1', '9', '8'], blanks=['Blank if Question 2a FADMUT = 0 (No)', 'Blank if Question 2a = 9 (Unknown)', 'Blank if Question 1 NWINFMUT ne 1 (Yes)'])
self.fields['FADMUSOX'] = nacc.uds3.Field(name='FADMUSOX', typename='Char', position=(112, 171), length=60, inclusive_range=None, allowable_values=[], blanks=['Blank if Question 2a FADMUT = 0 (No)', 'Blank if Question 2a = 9 (Unknown)', 'Blank if Question 2b FADMUSO ne 8 (Other)', 'Blank if Question 1 NWINFMUT ne 1 (Yes)'])
self.fields['FADMUSO'] = nacc.uds3.Field(name='FADMUSO', typename='Num', position=(110, 110), length=1, inclusive_range=(1, 3), allowable_values=['3', '2', '1', '9', '8'], blanks=['Blank if Question 2a FADMUT = 0 (No)', 'Blank if Question 2a FADMUT = 9 (Unknown)', 'Blank if Question 1 NWINFMUT ne 1 (Yes)'])
self.fields['FADMUSOX'] = nacc.uds3.Field(name='FADMUSOX', typename='Char', position=(112, 171), length=60, inclusive_range=None, allowable_values=[], blanks=['Blank if Question 2a FADMUT = 0 (No)', 'Blank if Question 2a FADMUT = 9 (Unknown)', 'Blank if Question 2b FADMUSO ne 8 (Other)', 'Blank if Question 1 NWINFMUT ne 1 (Yes)'])
self.fields['FFTDMUT'] = nacc.uds3.Field(name='FFTDMUT', typename='Num', position=(173, 173), length=1, inclusive_range=(0, 4), allowable_values=['9', '2', '1', '0', '8', '4', '3'], blanks=['Blank if Question 1 NWINFMUT ne 1 (Yes)'])
self.fields['FFTDMUTX'] = nacc.uds3.Field(name='FFTDMUTX', typename='Char', position=(175, 234), length=60, inclusive_range=None, allowable_values=[], blanks=['Blank if Question 3a FFTDMUT ne 8 (Other)', 'Blank if Question 1 NWINFMUT ne 1 (Yes)'])
self.fields['FFTDMUSO'] = nacc.uds3.Field(name='FFTDMUSO', typename='Num', position=(236, 236), length=1, inclusive_range=(1, 3), allowable_values=['3', '2', '1', '9', '8'], blanks=['Blank if Question 3a FFTDMUT = 0 (No)', 'Blank if Question 3a FFTDMUT = 9 (Unknown)', 'Blank if Question 1 NWINFMUT ne 1 (Yes)'])
Expand Down Expand Up @@ -735,15 +735,15 @@ def __init__(self):
self.fields['MCIAPEX'] = nacc.uds3.Field(name='MCIAPEX', typename='Num', position=(73, 73), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5b MCIAPLUS ne 1'])
self.fields['MCIAPVIS'] = nacc.uds3.Field(name='MCIAPVIS', typename='Num', position=(75, 75), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes', 'Blank if Question 5b MCIAPLUS ne 1'])
self.fields['MCINON1'] = nacc.uds3.Field(name='MCINON1', typename='Num', position=(77, 77), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)'])
self.fields['MCIN1LAN'] = nacc.uds3.Field(name='MCIN1LAN', typename='Num', position=(79, 79), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5b MCINON2 ne 1'])
self.fields['MCIN1ATT'] = nacc.uds3.Field(name='MCIN1ATT', typename='Num', position=(81, 81), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5b MCINON2 ne 1'])
self.fields['MCIN1EX'] = nacc.uds3.Field(name='MCIN1EX', typename='Num', position=(83, 83), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5b MCINON2 ne 1'])
self.fields['MCIN1VIS'] = nacc.uds3.Field(name='MCIN1VIS', typename='Num', position=(85, 85), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5b MCINON2 ne 1'])
self.fields['MCIN1LAN'] = nacc.uds3.Field(name='MCIN1LAN', typename='Num', position=(79, 79), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5c MCINON1 ne 1'])
self.fields['MCIN1ATT'] = nacc.uds3.Field(name='MCIN1ATT', typename='Num', position=(81, 81), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5c MCINON1 ne 1'])
self.fields['MCIN1EX'] = nacc.uds3.Field(name='MCIN1EX', typename='Num', position=(83, 83), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5c MCINON1 ne 1'])
self.fields['MCIN1VIS'] = nacc.uds3.Field(name='MCIN1VIS', typename='Num', position=(85, 85), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5c MCINON1 ne 1'])
self.fields['MCINON2'] = nacc.uds3.Field(name='MCINON2', typename='Num', position=(87, 87), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)'])
self.fields['MCIN2LAN'] = nacc.uds3.Field(name='MCIN2LAN', typename='Num', position=(89, 89), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5b MCINON2 ne 1'])
self.fields['MCIN2ATT'] = nacc.uds3.Field(name='MCIN2ATT', typename='Num', position=(91, 91), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5b MCINON2 ne 1'])
self.fields['MCIN2EX'] = nacc.uds3.Field(name='MCIN2EX', typename='Num', position=(93, 93), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5b MCINON2 ne 1'])
self.fields['MCIN2VIS'] = nacc.uds3.Field(name='MCIN2VIS', typename='Num', position=(95, 95), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5b MCINON2 ne 1'])
self.fields['MCIN2LAN'] = nacc.uds3.Field(name='MCIN2LAN', typename='Num', position=(89, 89), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5d MCINON2 ne 1'])
self.fields['MCIN2ATT'] = nacc.uds3.Field(name='MCIN2ATT', typename='Num', position=(91, 91), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5d MCINON2 ne 1'])
self.fields['MCIN2EX'] = nacc.uds3.Field(name='MCIN2EX', typename='Num', position=(93, 93), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5d MCINON2 ne 1'])
self.fields['MCIN2VIS'] = nacc.uds3.Field(name='MCIN2VIS', typename='Num', position=(95, 95), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)', 'Blank if Question 5d MCINON2 ne 1'])
self.fields['IMPNOMCI'] = nacc.uds3.Field(name='IMPNOMCI', typename='Num', position=(97, 97), length=1, inclusive_range=(0, 1), allowable_values=['1', '0'], blanks=['Blank if Question 2 NORMCOG = 1 (Yes)', 'Blank if Question 3 DEMENTED = 1 (Yes)'])
self.fields['AMYLPET'] = nacc.uds3.Field(name='AMYLPET', typename='Num', position=(99, 99), length=1, inclusive_range=(0, 1), allowable_values=['8', '1', '0'], blanks=[])
self.fields['AMYLCSF'] = nacc.uds3.Field(name='AMYLCSF', typename='Num', position=(101, 101), length=1, inclusive_range=(0, 1), allowable_values=['8', '1', '0'], blanks=[])
Expand Down
97 changes: 49 additions & 48 deletions nacc/uds3/ivp/builder.py
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Original file line number Diff line number Diff line change
Expand Up @@ -935,55 +935,56 @@ def add_z1_or_z1x(record, packet):
if (int(record['visityr'])>2018) or (int(record['visityr'])==2018 and int(record['visitmo'])>4) or \
(int(record['visityr'])==2018 and int(record['visitmo'])==4 and int(record['visitday'])>=2):
z1x = ivp_forms.FormZ1X()
z1x.LANGA1 = record['a1lang']
z1x.LANGA2 = record['a2lang']
z1x.A2SUB = record['a2sub_095a3b']
z1x.A2NOT = record['a2not_21e87d']
z1x.LANGA3 = record['a3lang']
z1x.A3SUB = record['a3sub_2b0d69']
z1x.A3NOT = record['a3not_c7cb57']
z1x.LANGA4 = record['a4lang']
z1x.A4SUB = record['a4sub_2c437c']
z1x.A4NOT = record['a4not_c4e53e']
z1x.LANGA5 = record['a5lang']
z1x.LANGB1 = record['b1lang']
z1x.B1SUB = record['b1sub_3c9b3b']
z1x.B1NOT = record['b1not_8b7733']
z1x.LANGB4 = record['b4lang']
z1x.LANGB5 = record['b5lang']
z1x.B5SUB = record['b5sub_712f66']
z1x.B5NOT = record['b5not_a4b779']
z1x.LANGB6 = record['b6lang']
z1x.B6SUB = record['b6sub_35db4c']
z1x.B6NOT = record['b6not_06dff0']
z1x.LANGB7 = record['b7lang']
z1x.B7SUB = record['b7sub_7e2220']
z1x.B7NOT = record['b7not_2dfac5']
z1x.LANGB8 = record['b8lang']
z1x.LANGB9 = record['b9lang']
z1x.LANGC2 = record['c2lang']
z1x.LANGD1 = record['d1lang']
z1x.LANGD2 = record['d2lang']
z1x.LANGA3A = record['a3alang']
z1x.FTDA3AFS = record['a3asubmitted']
z1x.FTDA3AFR = record['a3anot']
z1x.LANGB3F = record['b3flang']
z1x.LANGB9F = record['b9flang']
z1x.LANGC1F = record['c1flang']
z1x.LANGC2F = record['c2flang']
z1x.LANGC3F = record['c3flang']
z1x.LANGC4F = record['c4flang']
z1x.FTDC4FS = record['c4fsubmitted']
z1x.FTDC4FR = record['c4fnot']
z1x.FTDC5FS = record['c5fsubmitted']
z1x.FTDC5FR = record['c5fnot']
z1x.FTDC6FS = record['c6fsubmitted']
z1x.FTDC6FR = record['c6fnot']
z1x.LANGE2F = record['e2flang']
z1x.LANGE3F = record['e3flang']
z1x.LANGCLS = record['clslang']
z1x.CLSSUB = record['clssubmitted']
z1x.LANGA1 = record['langa1']
z1x.LANGA2 = record['langa2']
z1x.A2SUB = record['a2sub']
z1x.A2NOT = record['a2not']
z1x.LANGA3 = record['langa3']
z1x.A3SUB = record['a3sub']
z1x.A3NOT = record['a3not']
z1x.LANGA4 = record['langa4']
z1x.A4SUB = record['a4sub']
z1x.A4NOT = record['a4not']
z1x.LANGA5 = record['langa5']
z1x.LANGB1 = record['langb1']
z1x.B1SUB = record['b1sub']
z1x.B1NOT = record['b1not']
z1x.LANGB4 = record['langb4']
z1x.LANGB5 = record['langb5']
z1x.B5SUB = record['b5sub']
z1x.B5NOT = record['b5not']
z1x.LANGB6 = record['langb6']
z1x.B6SUB = record['b6sub']
z1x.B6NOT = record['b6not']
z1x.LANGB7 = record['langb7']
z1x.B7SUB = record['b7sub']
z1x.B7NOT = record['b7not']
z1x.LANGB8 = record['langb8']
z1x.LANGB9 = record['langb9']
z1x.LANGC2 = record['langc2']
z1x.LANGD1 = record['langd1']
z1x.LANGD2 = record['langd2']
z1x.LANGA3A = record['langa3a']
z1x.FTDA3AFS = record['ftda3afs']
z1x.FTDA3AFR = record['ftda3afr']
z1x.LANGB3F = record['langb3f']
z1x.LANGB9F = record['langb9f']
z1x.LANGC1F = record['langc1f']
z1x.LANGC2F = record['langc2f']
z1x.LANGC3F = record['langc3f']
z1x.LANGC4F = record['langc4f']
z1x.FTDC4FS = record['ftdc4fs']
z1x.FTDC4FR = record['ftdc4fr']
z1x.FTDC5FS = record['ftdc5fs']
z1x.FTDC5FR = record['ftdc5fr']
z1x.FTDC6FS = record['ftdc6fs']
z1x.FTDC6FR = record['ftdc6fr']
z1x.LANGE2F = record['lange2f']
z1x.LANGE3F = record['lange3f']
z1x.LANGCLS = record['langcls']
z1x.CLSSUB = record['clssub']
packet.insert(0, z1x)

else:
z1 = ivp_forms.FormZ1()
z1.A2SUB = record['a2sub']
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2 changes: 2 additions & 0 deletions nacculator_cfg.ini.example
View file
Original file line number Diff line number Diff line change
Expand Up @@ -10,6 +10,8 @@ redcap_server: Your Redcap Server
filepath: path/to/current-db-subjects.csv

[filter_fix_headers]
# Write in format:
# old_header: corrected_header
c1s_2a_npsylan: c1s_2_npsycloc
c1s_2a_npsylanx: c1s_2a_npsylan
b6s_2a1_npsylanx: c1s_2a1_npsylanx
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