Tuñí's Cauldron of Everything

My Cauldron of Everything; mainly helper bash and py scripts

Name		Name	Last commit message	Last commit date
Latest commit History 24 Commits
LICENSE		LICENSE
README.md		README.md
bamtofastq.sh		bamtofastq.sh
bamtofastq_samtools.sh		bamtofastq_samtools.sh
boxplot_QC_table.R		boxplot_QC_table.R
boxplotteR_ggplot.R		boxplotteR_ggplot.R
cleanup		cleanup
create_list.sh		create_list.sh
create_samplesheet_s3.sh		create_samplesheet_s3.sh
filter_less_than_100.sh		filter_less_than_100.sh
filter_more_than_100.sh		filter_more_than_100.sh
generate_heatmap.R		generate_heatmap.R
geoToSra.py		geoToSra.py
makeSamplesheet.py		makeSamplesheet.py
qualimap.sh		qualimap.sh
sra_download_from_ncbi.sh		sra_download_from_ncbi.sh
sra_download_from_s3.sh		sra_download_from_s3.sh
sra_download_from_s3_with_subsamping_and_gzipping.sh		sra_download_from_s3_with_subsamping_and_gzipping.sh
sra_download_from_s3_with_subsamping_and_gzipping_parallel.sh		sra_download_from_s3_with_subsamping_and_gzipping_parallel.sh
subsample.sh		subsample.sh
test_pipeline.sh		test_pipeline.sh
vertical_to_csv.sh		vertical_to_csv.sh

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