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Releases: cumc-dbmi/cehrbert

v1.3.1

09 Dec 21:08
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fixed a bug in reading the predicted_boolean_probability for computin…

v1.3.0

09 Dec 19:45
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What's Changed

Full Changelog: v1.2.9...v1.3.0

v1.2.9

06 Dec 13:24
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What's Changed

  • Fixed transformers==4.40.0 and tokenizers==0.19.9 in pyproject.toml by @ChaoPang in #80

Full Changelog: v1.2.8...v1.2.9

v1.2.8

05 Dec 12:15
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Full Changelog: v1.2.7...v1.2.8

v1.2.7

05 Dec 12:09
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added a check on birth_datetime in the meds to cehrbert data conversi…

v1.2.5

15 Nov 14:39
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What's Changed

  • Extended the runner arg parser and fixed a typo in DataTrainingArguments by @ChaoPang in #72
  • Fixed Fine-tune example code in ReadME by @joshuasami in #74
  • fixed the streaming bug by @ChaoPang in #75

New Contributors

Full Changelog: v1.2.4...v1.2.5

v1.2.4: Meds conversion time token fix (#71)

30 Oct 19:49
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* sort events in patient_block; get visit_end_datetime from the property otherwise infer it from the last event

* fixed age batch_norm in the LSTM finetuning

* fixed a bug where time token is not created when the time_delta is 0

* added meds_exclude_tables to the login meds_utils

v1.2.3

25 Oct 17:33
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check whether patient_id exists in the meds_reader database because s…

v1.2.2

14 Oct 18:02
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upgraded cehrbert_data from v0.0.3 to v0.0.4 (#65)

v1.2.1

10 Oct 15:20
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What's Changed

  • created a helper function to convert the existing huggingface dataset to an iterable dataset by @ChaoPang in #64

Full Changelog: v1.2.0...v1.2.1