Fix duplicate job submissions on reload. #7954
Workflow file for this run
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| name: functional tests | |
| on: | |
| workflow_dispatch: | |
| pull_request: | |
| paths-ignore: | |
| - '.github/workflows/*.ya?ml' | |
| - '!.github/workflows/test_functional.yml' | |
| - 'cylc/flow/etc/syntax/**' | |
| - 'etc/syntax/**' | |
| - 'tests/conftest.py' | |
| - 'tests/unit/**' | |
| - 'tests/integration/**' | |
| - '**.md' | |
| - '**/README*/**' | |
| push: | |
| branches: | |
| - master | |
| - '8.*.x' | |
| paths-ignore: | |
| - '.github/workflows/*.ya?ml' | |
| - '!.github/workflows/test_functional.yml' | |
| - 'cylc/flow/etc/syntax/**' | |
| - 'etc/syntax/**' | |
| - 'tests/conftest.py' | |
| - 'tests/unit/**' | |
| - 'tests/integration/**' | |
| - '**.md' | |
| - '**/README*/**' | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| runs-on: ${{ matrix.os }} | |
| name: ${{ matrix.name || matrix.chunk }} | |
| timeout-minutes: 45 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ['ubuntu-latest'] | |
| python-version: ['3.7'] | |
| test-base: ['tests/f'] | |
| chunk: ['1/4', '2/4', '3/4', '4/4'] | |
| platform: ['_local_background* _local_at*'] | |
| # NOTE: includes must define ALL of the matrix values | |
| include: | |
| # latest python | |
| - name: 'py-3-latest' | |
| os: 'ubuntu-latest' | |
| python-version: '3' | |
| test-base: 'tests/f' | |
| chunk: '1/4' | |
| platform: '_local_background*' | |
| # tests/k | |
| - name: 'flaky' | |
| os: 'ubuntu-latest' | |
| python-version: '3.7' | |
| test-base: 'tests/k' | |
| chunk: '1/1' | |
| platform: '_local_background* _local_at*' | |
| # remote platforms | |
| - name: '_remote_background_indep_poll' | |
| os: 'ubuntu-latest' | |
| python-version: '3.7' | |
| test-base: 'tests/f tests/k' | |
| chunk: '1/1' | |
| platform: '_remote_background_indep_poll _remote_at_indep_poll' | |
| - name: '_remote_background_indep_tcp' | |
| os: 'ubuntu-latest' | |
| test-base: 'tests/f tests/k' | |
| python-version: '3.7' | |
| chunk: '1/1' | |
| platform: '_remote_background_indep_tcp _remote_at_indep_tcp' | |
| # macos | |
| - name: 'macos 1/5' | |
| os: 'macos-latest' | |
| python-version: '3.9' | |
| test-base: 'tests/f' | |
| chunk: '1/5' | |
| platform: '_local_background*' | |
| - name: 'macos 2/5' | |
| os: 'macos-latest' | |
| python-version: '3.9' | |
| test-base: 'tests/f' | |
| chunk: '2/5' | |
| platform: '_local_background*' | |
| env: | |
| # Use non-UTC time zone | |
| TZ: XXX-05:30 | |
| # these vars are used by etc/bin/run-functional-tests | |
| CYLC_TEST_PLATFORMS: ${{ matrix.platform }} | |
| CYLC_COVERAGE: 1 | |
| REMOTE_PLATFORM: ${{ contains(matrix.platform, '_remote') }} | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Configure Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Create global config | |
| run: | | |
| CONF_PATH="$HOME/.cylc/flow/8" | |
| mkdir -p "$CONF_PATH" | |
| touch "$CONF_PATH/global.cylc" | |
| ln -s "$CONF_PATH/global.cylc" "$CONF_PATH/global-tests.cylc" | |
| echo "GLOBAL_CFG_PATH=${CONF_PATH}/global.cylc" >> "$GITHUB_ENV" | |
| - name: Patch DNS | |
| uses: cylc/release-actions/patch-dns@v1 | |
| - name: Add localhost entries to global config | |
| if: startsWith(runner.os, 'macos') | |
| run: | | |
| cat >> "$GLOBAL_CFG_PATH" <<__HERE__ | |
| [platforms] | |
| [[localhost, $(hostname -f), $(hostname -s)]] | |
| hosts = localhost | |
| install target = localhost | |
| ssh command = ssh -oBatchMode=yes -oConnectTimeout=8 -oStrictHostKeyChecking=no | |
| __HERE__ | |
| cat "$GLOBAL_CFG_PATH" | |
| - name: Brew Install | |
| if: startsWith(matrix.os, 'macos') | |
| run: | | |
| # install system deps | |
| brew update | |
| brew install bash coreutils gnu-sed grep | |
| # add GNU coreutils and sed to the user PATH | |
| # (see instructions in brew install output) | |
| echo "$(brew --prefix)/opt/coreutils/libexec/gnubin" >> "${GITHUB_PATH}" | |
| echo "$(brew --prefix)/opt/grep/libexec/gnubin" >> "${GITHUB_PATH}" | |
| echo "$(brew --prefix)/opt/gnu-sed/libexec/gnubin" >> "${GITHUB_PATH}" | |
| # add coreutils to the bashrc too (for jobs) | |
| cat >> "${HOME}/.bashrc" <<__HERE__ | |
| PATH="$(brew --prefix)/opt/coreutils/libexec/gnubin:$PATH" | |
| PATH="$(brew --prefix)/opt/grep/libexec/gnubin:$PATH" | |
| PATH="$(brew --prefix)/opt/gnu-sed/libexec/gnubin:$PATH" | |
| export PATH | |
| __HERE__ | |
| - name: Apt-Get Install | |
| if: startsWith(matrix.os, 'ubuntu') | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y sqlite3 tree at | |
| - name: Add .github/bin/ to PATH | |
| # Sets up mocked mail command & any other custom executables | |
| run: echo "${{ github.workspace }}/.github/bin" >> $GITHUB_PATH | |
| - name: Install | |
| run: | | |
| pip install -e ."[all]" | |
| mkdir "$HOME/cylc-run" | |
| - name: Configure Atrun | |
| if: contains(matrix.platform, '_local_at') | |
| run: | | |
| cat >> "$GLOBAL_CFG_PATH" << __HERE__ | |
| [platforms] | |
| [[_local_at_indep_tcp]] | |
| hosts = localhost | |
| install target = localhost | |
| job runner = at | |
| __HERE__ | |
| - name: Swarm Configure | |
| run: | | |
| etc/bin/swarm --yes --debug configure | |
| - name: Swarm Build | |
| if: env.REMOTE_PLATFORM == 'true' | |
| run: | | |
| # `swarm configure` seems to get ignored so override the user config | |
| cp etc/conf/ssh_config $HOME/.ssh/config | |
| # build and run the swarm | |
| etc/bin/swarm --yes --debug build | |
| etc/bin/swarm --yes --debug run | |
| # test that it's up and running before proceeding | |
| sleep 1 | |
| ssh -vv _remote_background_indep_poll hostname | |
| - name: Configure git # Needed by the odd test | |
| uses: cylc/release-actions/configure-git@v1 | |
| - name: Filter Tests | |
| env: | |
| # NOTE: we only want the CHUNK set in this step else we will | |
| # re-chunk tests later when they run | |
| CHUNK: ${{ matrix.chunk }} | |
| run: | | |
| etc/bin/run-functional-tests \ | |
| --dry \ | |
| ${{ matrix.test-base }} \ | |
| > test-file | |
| if [[ $REMOTE_PLATFORM == 'true' ]]; then | |
| # skip tests that don't configure platform requirements | |
| grep -l --color=never REQUIRE_PLATFORM $(cat test-file) > test-file | |
| fi | |
| - name: Test | |
| id: test | |
| timeout-minutes: 35 | |
| continue-on-error: true | |
| run: | | |
| echo "finished=false" >> $GITHUB_OUTPUT | |
| if [[ '${{ matrix.test-base }}' == 'tests/k' ]]; then | |
| NPROC=4 | |
| else | |
| NPROC=8 | |
| fi | |
| # NOTE: test base is purposefully un-quoted | |
| etc/bin/run-functional-tests \ | |
| -j "${NPROC}" \ | |
| --state=save \ | |
| $(cat test-file) \ | |
| || (echo "finished=true" >> $GITHUB_OUTPUT && false) | |
| - name: Time Out | |
| if: steps.test.outcome == 'failure' && steps.test.outputs.finished != 'true' | |
| run: | | |
| echo '::error:: tests timed-out' | |
| # help to identify the tests that were running at the time | |
| cylc scan --state=all --format=rich --color-blind | |
| # fail the workflow | |
| false | |
| - name: Re-run failed tests | |
| timeout-minutes: 10 | |
| if: steps.test.outcome == 'failure' && steps.test.outputs.finished == 'true' | |
| run: | | |
| # re-run failed tests providing that they didn't time out first time | |
| # TODO: make the tests deterministic so we don't need to do this | |
| etc/bin/run-functional-tests \ | |
| -j 1 \ | |
| -v \ | |
| --state=save,failed $(cat test-file) | |
| - name: Copy cylc-run out of container | |
| if: failure() && steps.test.outcome == 'failure' && env.REMOTE_PLATFORM == 'true' | |
| run: | | |
| # pick the first host in the list | |
| host="$(cut -d ' ' -f 1 <<< "${{ matrix.platform }}")" | |
| # copy back the remote cylc-run dir | |
| rsync -av \ | |
| "${host}:/root/cylc-run/" \ | |
| "${HOME}/cylc-run/${host}/" | |
| - name: Debug | |
| if: failure() && steps.test.outcome == 'failure' | |
| timeout-minutes: 1 | |
| run: | | |
| find "$HOME/cylc-run" -name '*.err' -type f \ | |
| -exec echo \; -exec echo '====== {} ======' \; -exec cat '{}' \; | |
| find "$HOME/cylc-run" -name '*.log' -type f \ | |
| -exec echo \; -exec echo '====== {} ======' \; -exec cat '{}' \; | |
| find "${TMPDIR:-/tmp}/${USER}/cylctb-"* -type f \ | |
| -exec echo \; -exec echo '====== {} ======' \; -exec cat '{}' \; | |
| - name: Set artifact upload name | |
| if: always() | |
| id: uploadname | |
| run: | | |
| # artifact name cannot contain '/' characters | |
| CID="$(sed 's|/|-|g' <<< "${{ matrix.name || matrix.chunk }}")" | |
| echo "uploadname=$CID" >> $GITHUB_OUTPUT | |
| - name: Upload failed tests artifact | |
| if: failure() && steps.test.outcome == 'failure' | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: cylc-run (${{ steps.uploadname.outputs.uploadname }}) | |
| path: ~/cylc-run/ | |
| include-hidden-files: true | |
| - name: Fetch Remote Coverage | |
| if: env.REMOTE_PLATFORM == 'true' | |
| run: | | |
| # pick the first host in the list | |
| host="$(cut -d ' ' -f 1 <<< "${{ matrix.platform }}")" | |
| # copy back the remote coverage files | |
| rsync -av \ | |
| "${host}:/cylc/" \ | |
| '.' \ | |
| --include='.coverage*' \ | |
| --exclude='*' \ | |
| >rsyncout | |
| cat rsyncout | |
| # fiddle the python source location to match the local system | |
| for db in $(grep --color=never '.coverage\.' rsyncout); do | |
| sqlite3 "$db" " | |
| UPDATE file | |
| SET path = REPLACE(path, '/cylc/cylc/', '$PWD/cylc/') | |
| " | |
| done | |
| - name: Shutdown | |
| if: always() | |
| run: | | |
| etc/bin/swarm kill | |
| - name: Combine coverage & report | |
| run: | | |
| coverage combine -a | |
| coverage xml | |
| coverage report | |
| - name: Upload coverage artifact | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: coverage_${{ steps.uploadname.outputs.uploadname }} | |
| path: coverage.xml | |
| retention-days: 7 | |
| codecov: | |
| needs: test | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 2 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Download coverage artifacts | |
| uses: actions/download-artifact@v4 | |
| - name: Codecov upload | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| name: ${{ github.workflow }} | |
| flags: functional-tests | |
| fail_ci_if_error: true | |
| verbose: true | |
| # Token not required for public repos, but avoids upload failure due | |
| # to rate-limiting (but not for PRs opened from forks) | |
| token: ${{ secrets.CODECOV_TOKEN }} |