Cylon Build and Scaling Test on UVA CS Cluster (#683)

* Cylon Build and Scaling Test on UVA CS Cluster

Signed-off-by: Arup Sarker <[email protected]>

* Update README.md

* Update README.md

* Update README.md

* Update README.md

---------

Signed-off-by: Arup Sarker <[email protected]>

rivanna/README.md

@@ -49,7 +49,7 @@ pip install openssl-python
 python3 -m pip install urllib3==1.26.6
 ```
 
-We will slum script to run the scaling operation.
+We will use a slurm script to run the scaling operation.
 
 ```shell
 sbatch rivanna/scripts/scaling_job.slurm

rivanna/scripts/README.md

@@ -6,7 +6,7 @@ pip install openssl-python
 python3 -m pip install urllib3==1.26.6
 ```
 
-2. Make change in the ```cylon-experiment-setup.py ``` or ```cylon-experiment-setup.py ``` for the configurations changes.
+2. Make change in the ```cylon-experiment-setup.py ``` or ```rp-experiment-setup.py ``` for the configurations changes.
 
 ```
 combination = [\

target/rivanna/README.md

@@ -1,105 +1,60 @@
-# Developing and Using of Cylon on Rivanna
-
-Data: August 4th, 2023
-
-# Using Cylon
-
-Currently we recommend to use the instrctions for developers.
-For using cylon we recommend to follow the same instructions, but replaceing the **git clone** command with
-
-````
-git clone https://github.com/cylondata/cylon.git
-````
-
-
-## Decveloping with Cylon
-
-### Clone Cylon
-
-First you must create a fork of cylon whcih is easiest done with the GUI.
-
-Please visit with your browser
-
-* <https://github.com/cylondata/cylon>
-
-and cick on fork. Let us assume you have the username xyz, Then the easiseets is to create a shortcut for the git user
-to follow our documentation.
-
-```bash
-exort GITUSER=xyz`
-git clone https://github.com/$GITUSER/cylon.git
-cd cylon
-```
-
-> Note: use the following line in case you do not want to fork
->
-> ```bash
-> git clone https://github.com/cylondata/cylon.git
-> cd cylon
-> ```
-
-### Compile Cylon on Rivanna
-
-The following lines are included in [target/rivanna/install.sh](https://github.com/cylondata/cylon/blob/main/target/rivanna/README.md)
-
-Before executing it, please review it with
-
-```bash
-target/rivanna/install.sh
-```
-
-If you need to make modifications, copy the script and execute the copy.
-
-If you are happy with the original script, please execute it with 
-
-```bash
-time ./target/rivanna/install.sh
-```
-
-The execution of the script will take some time.
-
-```
-real	61m17.789s
-user	53m10.282s
-sys   	6m52.742s
-```
-
-The script will look as follows
-
-```bash
-#! /bin/sh
-PWD=`pwd`
-BUILD_PATH=$PWD/build
-
-module load gcc/9.2.0 openmpi/3.1.6 python/3.7.7 cmake/3.23.3
-
-python -m venv $PWD/cy-rp-env
-
-source $PWD/cy-rp-env/bin/activate
-
-# pip install -r $PWD/requirements.txt
-
-pip install pip -U
-pip install pytest
-pip install -U pytest-mpi
-pip install numpy
-# pip install pyarrow==9.0.0
-
-export CC=`which gcc`
-export CXX=`which g++`
-CC=gcc MPICC=mpicc pip install --no-binary mpi4py install mpi4py
-
-rm -rf build
-
-export LD_LIBRARY_PATH=$BUILD_PATH/arrow/install/lib64:$BUILD_PATH/glog/install/lib64:$BUILD_PATH/lib64:$BUILD_PATH/lib:$LD_LIBRARY_PATH
-
-time ./build.sh -pyenv $PWD/cy-rp-env -bpath $PWD/build --cpp --python --cython --test --cmake-flags "-DMPI_C_COMPILER=$(which mpicc) -DMPI_CXX_COMPILER=$(which mpicxx)"
-```
-
-## Acknowledgement
-
-This documentation is based on documentation and installation improvements provided by
-
-* Arup Sarker ([email protected], [email protected])
-* Niranda
-* Gregor von Laszewski ([email protected])
+# Running Cylon on Rivanna
+
+Arup Sarker ([email protected], [email protected])
+
+
+
+## Install instructions
+
+Rivanna is an HPC system offerbed by University of Virginia.
+This will use custom dependencies of the system gcc, openmpi version.
+
+```shell
+
+git clone https://github.com/cylondata/cylon.git
+cd cylon
+
+module load gcc/9.2.0 openmpi/3.1.6 python/3.7.7 cmake/3.23.3
+
+python -m venv $PWD/cy-rp-env
+
+source $PWD/cy-rp-env/bin/activate
+
+
+pip install pip -U
+pip install pytest
+
+export CC=`which gcc`
+export CXX=`which g++`
+CC=gcc MPICC=mpicc pip install --no-binary mpi4py install mpi4py
+pip install -U pytest-mpi
+pip install numpy
+pip install pyarrow==9.0.0
+
+
+rm -rf build
+BUILD_PATH=$PWD/build
+export LD_LIBRARY_PATH=$BUILD_PATH/arrow/install/lib64:$BUILD_PATH/glog/install/lib64:$BUILD_PATH/lib64:$BUILD_PATH/lib:$LD_LIBRARY_PATH
+
+./build.sh -pyenv $PWD/cy-rp-env -bpath $(pwd)/build --cpp --python_with_pyarrow --cython --test --cmake-flags "-DMPI_C_COMPILER=$(which mpicc) -DMPI_CXX_COMPILER=$(which mpicxx)"
+
+```
+It will take some time to build. So, grab a coffee!!!
+
+Let's perform a scaling operation with join. Before that, we have to install the dependencies as follow.
+
+```shell
+pip install cloudmesh-common
+pip install openssl-python
+python3 -m pip install urllib3==1.26.6
+```
+
+We will use a slurm script to run the scaling operation.
+
+```shell
+sbatch rivanna/scripts/scaling_job.slurm
+```
+
+For more details of the dependent libraries and Slurm scripts, Please checkout the following links:
+
+* <https://github.com/cylondata/cylon/tree/main/rivanna/scripts/scaling_job.slurm>