Merge pull request #387 from dandi/b2d-36

Add script for backfilling `reregisterurl` invocations

tools/backfill-reregister.sh

@@ -0,0 +1,21 @@
+#!/bin/bash
+# <https://github.com/dandi/backups2datalad/pull/36#issuecomment-2153627640>
+set -eux -o pipefail
+
+dandiset_root=/mnt/backup/dandi/dandisets
+
+cd "$dandiset_root"
+for ds in 0*
+do
+    cd "$ds"
+    embargo_status="$(git config --file .datalad/config --default OPEN --get dandi.dandiset.embargo-status)"
+    if [ "$embargo_status" = OPEN ] \
+        && git remote | grep -Fqx datalad \
+        && git log -S EMBARGOED -n1 -- .datalad/config | grep -q .
+    then
+        git annex find --include='*' --format='${key}\n' \
+            | git annex reregisterurl --batch --move-from datalad
+        git remote remove datalad
+    fi
+    cd -
+done