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added mouse standard genome name
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khoroshevskyi committed Nov 7, 2024
1 parent 86ba98b commit c0a54f5
Showing 1 changed file with 3 additions and 1 deletion.
4 changes: 3 additions & 1 deletion bedboss/utils.py
Original file line number Diff line number Diff line change
Expand Up @@ -36,8 +36,10 @@ def standardize_genome_name(input_genome: str, bedfile: str = None) -> str:
return "hg38"
elif input_genome == "hg19" or input_genome == "grch37":
return "hg19"
elif input_genome == "mm10":
elif input_genome == "mm10" or input_genome == "grcm38":
return "mm10"
elif input_genome == "mm9" or input_genome == "grcm37":
return "mm9"
# else:
# raise GenomeException("Incorrect genome assembly was provided")
else:
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