Real time render with SFML

.gitignore

@@ -1,3 +1,2 @@
 obj/
-tools/*.svg
 build/

.vscode/c_cpp_properties.json

@@ -0,0 +1,28 @@
+{
+    "configurations": [
+        {
+            "name": "Linux",
+            "browse": {
+                "path": [
+                    "${workspaceFolder}",
+                    "${workspaceFolder}/src/*"
+                ],
+                "limitSymbolsToIncludedHeaders": true
+            },
+            "includePath": [
+                "${default}",
+                "/usr/include/SFML",
+                "/usr/lib/x86_64-linux-gnu",
+                "/usr/include",
+                "/usr/include/opencv4",
+                "${workspaceFolder}/src/include"
+            ],
+            "defines": [],
+            "cStandard": "c17",
+            "cppStandard": "gnu++17",
+            "intelliSenseMode": "linux-gcc-x64",
+            "configurationProvider": "ms-vscode.makefile-tools"
+        }
+    ],
+    "version": 4
+}

.vscode/launch.json

@@ -0,0 +1,33 @@
+{
+    "configurations": [
+        {
+            "name": "C/C++: g++-11 build and debug active file",
+            "type": "cppdbg",
+            "request": "launch",
+            "program": "${workspaceFolder}/bin/Debug/biosim4",
+            "args": [
+                "${workspaceFolder}/biosim4.ini"
+            ],
+            "cwd": "${workspaceFolder}",
+            "stopAtEntry": false,
+            "environment": [],
+            "externalConsole": false,
+            "MIMode": "gdb",
+            "setupCommands": [
+                {
+                    "description": "Enable pretty-printing for gdb",
+                    "text": "-enable-pretty-printing",
+                    "ignoreFailures": true
+                },
+                {
+                    "description": "Set Disassembly Flavor to Intel",
+                    "text": "-gdb-set disassembly-flavor intel",
+                    "ignoreFailures": true
+                }
+            ],
+            "preLaunchTask": "${defaultBuildTask}",
+            "miDebuggerPath": "/usr/bin/gdb"
+        }
+    ],
+    "version": "2.0.0"
+}

.vscode/settings.json

@@ -0,0 +1,77 @@
+{
+    "files.associations": {
+        "*.embeddedhtml": "html",
+        "array": "cpp",
+        "atomic": "cpp",
+        "bit": "cpp",
+        "*.tcc": "cpp",
+        "cctype": "cpp",
+        "chrono": "cpp",
+        "clocale": "cpp",
+        "cmath": "cpp",
+        "compare": "cpp",
+        "complex": "cpp",
+        "concepts": "cpp",
+        "condition_variable": "cpp",
+        "cstdarg": "cpp",
+        "cstddef": "cpp",
+        "cstdint": "cpp",
+        "cstdio": "cpp",
+        "cstdlib": "cpp",
+        "cstring": "cpp",
+        "ctime": "cpp",
+        "cwchar": "cpp",
+        "cwctype": "cpp",
+        "deque": "cpp",
+        "list": "cpp",
+        "map": "cpp",
+        "set": "cpp",
+        "string": "cpp",
+        "unordered_map": "cpp",
+        "vector": "cpp",
+        "exception": "cpp",
+        "algorithm": "cpp",
+        "functional": "cpp",
+        "iterator": "cpp",
+        "memory": "cpp",
+        "memory_resource": "cpp",
+        "numeric": "cpp",
+        "random": "cpp",
+        "ratio": "cpp",
+        "string_view": "cpp",
+        "system_error": "cpp",
+        "tuple": "cpp",
+        "type_traits": "cpp",
+        "utility": "cpp",
+        "fstream": "cpp",
+        "initializer_list": "cpp",
+        "iomanip": "cpp",
+        "iosfwd": "cpp",
+        "iostream": "cpp",
+        "istream": "cpp",
+        "limits": "cpp",
+        "mutex": "cpp",
+        "new": "cpp",
+        "numbers": "cpp",
+        "ostream": "cpp",
+        "semaphore": "cpp",
+        "sstream": "cpp",
+        "stdexcept": "cpp",
+        "stop_token": "cpp",
+        "streambuf": "cpp",
+        "thread": "cpp",
+        "cinttypes": "cpp",
+        "typeinfo": "cpp",
+        "cassert": "cpp",
+        "any": "cpp",
+        "bitset": "cpp",
+        "codecvt": "cpp",
+        "unordered_set": "cpp",
+        "optional": "cpp",
+        "regex": "cpp",
+        "typeindex": "cpp",
+        "variant": "cpp",
+        "forward_list": "cpp",
+        "valarray": "cpp"
+    }
+}

.vscode/tasks.json

@@ -0,0 +1,20 @@
+{
+    "tasks": [
+        {
+            "type": "cppbuild",
+            "label": "C/C++: g++ build active file",
+            "command": "make debug",
+            "args": [
+            ],
+            "options": {
+                "cwd": "${workspaceFolder}/"
+            },
+            "problemMatcher": [
+                "$gcc"
+            ],
+            "group": "build",
+            "detail": "Task generated by Debugger."
+        }
+    ],
+    "version": "2.0.0"
+}

Makefile

@@ -11,6 +11,7 @@ CXXFLAGS += \
   -std=c++17 \
   -fexceptions \
   -fopenmp \
+  -I./src/include \
   $(shell pkg-config --cflags opencv4)
 
 LDFLAGS += \
@@ -19,6 +20,10 @@ LDFLAGS += \
   -lopencv_videoio \
   -lgomp \
   -lpthread \
+  -lsfml-graphics \
+  -lsfml-window \
+  -lsfml-system \
+  -ltgui \
   -fopenmp
 
 ifeq ($(BUILD),debug)
@@ -32,10 +37,19 @@ else
   LDFLAGS += -O3 -s
 endif
 
-SOURCE :=  $(wildcard src/*.cpp src/*.h)
+SOURCE :=  $(wildcard src/*.cpp src/*.h src/userio/*.cpp src/userio/*.h \
+  src/userio/sfmlComponents/*.cpp src/userio/sfmlComponents/*.h \
+  src/utils/*.cpp src/utils/*.h \
+  src/ai/*.cpp src/ai/*.h \
+  src/survivalCriteria/*.cpp src/survivalCriteria/*.h \
+  src/userio/sfmlComponents/flowComponents/*.cpp src/userio/sfmlComponents/flowComponents/*.h \
+  src/userio/sfmlComponents/settingsComponents/*.cpp src/userio/sfmlComponents/settingsComponents/*.h \
+  )
 CXXSOURCE :=  $(filter %.cpp, $(SOURCE))
 HEADERS :=  $(filter %.h, $(SOURCE))
 OBJS := $(subst src/,$(OBJ_DIR)/, $(CXXSOURCE:.cpp=.o))
+INCLUDES = -I./src/include
+LIBS = -L/path/to/cereal/lib -lcereal
 
 
 all: debug release
@@ -44,10 +58,24 @@ all: debug release
 before_debug:
 	test -d bin/Debug || mkdir -p bin/Debug
 	test -d obj/Debug/src || mkdir -p obj/Debug/src
+	test -d obj/Debug/src/userio || mkdir -p obj/Debug/src/userio
+	test -d obj/Debug/src/userio/sfmlComponents || mkdir -p obj/Debug/src/userio/sfmlComponents
+	test -d obj/Debug/src/userio/sfmlComponents/flowComponents || mkdir -p obj/Debug/src/userio/sfmlComponents/flowComponents
+	test -d obj/Debug/src/userio/sfmlComponents/settingsComponents || mkdir -p obj/Debug/src/userio/sfmlComponents/settingsComponents
+	test -d obj/Debug/src/utils || mkdir -p obj/Debug/src/utils
+	test -d obj/Debug/src/ai || mkdir -p obj/Debug/src/ai
+	test -d obj/Debug/src/survivalCriteria || mkdir -p obj/Debug/src/survivalCriteria
 
 before_release:
 	test -d bin/Release || mkdir -p bin/Release
 	test -d obj/Release/src || mkdir -p obj/Release/src
+	test -d obj/Release/src/userio || mkdir -p obj/Release/src/userio
+	test -d obj/Release/src/userio/sfmlComponents || mkdir -p obj/Release/src/userio/sfmlComponents
+	test -d obj/Release/src/userio/sfmlComponents/flowComponents || mkdir -p obj/Release/src/userio/sfmlComponents/flowComponents
+	test -d obj/Release/src/userio/sfmlComponents/settingsComponents || mkdir -p obj/Release/src/userio/sfmlComponents/settingsComponents
+	test -d obj/Release/src/utils || mkdir -p obj/Release/src/utils
+	test -d obj/Release/src/ai || mkdir -p obj/Release/src/ai
+	test -d obj/Release/src/survivalCriteria || mkdir -p obj/Release/src/survivalCriteria
 
 .PHONY : release debug    
 debug: before_debug
@@ -77,7 +105,7 @@ clean_release:
 	$(RM) -f bin/Release/biosim4
 
 distclean: clean
-	$(RM) -f logs/* images/*
+	$(RM) -f Output/Images/* Output/Videos/* Output/Logs/* Output/Saves/* Output/Profiling/*
 
 .PHONY: all clean distclean
 

Output/Profiling/.gitignore

@@ -0,0 +1,5 @@
+# Ignore everything in this directory
+*
+# Except this file
+!.gitignore
+

Output/Saves/.gitignore

@@ -0,0 +1,5 @@
+# Ignore everything in this directory
+*
+# Except this file
+!.gitignore
+

Output/Videos/.gitignore

@@ -0,0 +1,5 @@
+# Ignore everything in this directory
+*
+# Except this file
+!.gitignore
+

README.md

@@ -1,5 +1,32 @@
 # biosim4
 
+Fork of https://github.com/davidrmiller/biosim4
+
+### What has been done
+
+- heavy refactoring
+- a new output via SFML which renders individuals, challenge criterias and barriers in real-time with the ability to drag simulation (LMB), zoom in/out (scroll), select indiv (LMB)
+- UI to watch and control simulation with TGUI:
+  - pause/resume button, pause at start/end of generation
+  - slow or increase speed of simulation
+  - change some settings
+  - restart simulation
+  - save selected indiv's net to svg
+  - show indivs who would pass survival criteria if simulation end now
+- saving and loading simulations with "cereal" serialization library
+
+![screenshot](https://github.com/ilyabrilev/biosim4/blob/main/screenshot.png?raw=true)
+
+### Plans
+- expand UI functionality to controll simulation
+- implement recording of simulation, add ability to play it with time skipping, ability to go back (etc.)
+- hopefuly add more behaviour, events, resources to simulation
+
+### Requirements
+- sfml https://stackoverflow.com/questions/30696114/how-to-install-sfml-in-ubuntu
+- tgui 1.1 https://tgui.eu/tutorials/latest-stable/
+- cereal (it should work right of the box, but here is a link anyway https://uscilab.github.io/cereal/index.html)
+
 ## What is this?
 
 This pile of code was used to simulate biological creatures that evolve through natural selection.