updated to match exDE multi-species upgrade

DESCRIPTION

@@ -18,6 +18,7 @@ Depends:
   exDE
 Imports:
   stats,
+  expm,
   viridisLite
 Suggests:
     viridis,

NAMESPACE

@@ -1,12 +1,16 @@
 # Generated by roxygen2: do not edit by hand
 
+S3method(F_H,SEIR)
+S3method(F_H,SIR)
+S3method(F_H,garki)
 S3method(F_X,SEIR)
 S3method(F_X,SIR)
 S3method(F_X,garki)
 S3method(F_b,SEIR)
 S3method(F_b,SIR)
 S3method(F_b,garki)
 S3method(F_eggs,RMG)
+S3method(F_fqM,RMG)
 S3method(F_fqZ,RMG)
 S3method(F_pr,SEIR)
 S3method(F_pr,SIR)
@@ -16,10 +20,8 @@ S3method(HTC,SIR)
 S3method(HTC,garki)
 S3method(MBionomics,RMG)
 S3method(dMYZdt,RMG)
-S3method(dXdt,SEIRdX)
-S3method(dXdt,SEIRdXdH)
-S3method(dXdt,SIRdX)
-S3method(dXdt,SIRdXdH)
+S3method(dXdt,SEIR)
+S3method(dXdt,SIR)
 S3method(dXdt,garki)
 S3method(get_inits_MYZ,RMG)
 S3method(get_inits_X,SEIR)
@@ -33,10 +35,14 @@ S3method(parse_deout_MYZ,RMG)
 S3method(parse_deout_X,SEIR)
 S3method(parse_deout_X,SIR)
 S3method(parse_deout_X,garki)
-S3method(setup_MYZ,RMG)
-S3method(setup_X,SEIR)
-S3method(setup_X,SIR)
-S3method(setup_X,garki)
+S3method(setup_MYZinits,RMG)
+S3method(setup_MYZpar,RMG)
+S3method(setup_Xinits,SEIR)
+S3method(setup_Xinits,SIR)
+S3method(setup_Xinits,garki)
+S3method(setup_Xpar,SEIR)
+S3method(setup_Xpar,SIR)
+S3method(setup_Xpar,garki)
 S3method(split_stratum_by_biting,SIS)
 S3method(update_inits_MYZ,RMG)
 S3method(update_inits_X,SEIR)