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10 changes: 5 additions & 5 deletions README.md
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Expand Up @@ -46,7 +46,7 @@ Sagan Postdoctoral Fellow, University of Washington, 2015–2017.
<div class="list">


[**jax**](https://github.com/google/jax) — 29524 stars / 2693 forks
[**jax**](https://github.com/google/jax) — 29557 stars / 2696 forks
Composable transformations of Python+NumPy programs: differentiate,
vectorize, JIT to GPU/TPU, and more
[\[docs\]](http://jax.readthedocs.io/)
Expand All @@ -55,7 +55,7 @@ vectorize, JIT to GPU/TPU, and more
The tiniest of Gaussian Process libraries
[\[docs\]](https://tinygp.readthedocs.io)

[**emcee**](https://github.com/dfm/emcee) — 1450 stars / 432 forks
[**emcee**](https://github.com/dfm/emcee) — 1450 stars / 431 forks
The Python ensemble sampling toolkit for affine-invariant MCMC
[\[docs\]](https://emcee.readthedocs.io)

Expand All @@ -78,7 +78,7 @@ Render probabilistic graphical models using matplotlib
## Publications

refereed: 104 / first author: 9 / citations: 20,831 / h-index: 46
(2024-08-19)
(2024-08-20)

### Refereed publications

Expand Down Expand Up @@ -622,7 +622,7 @@ Hogg, David W.; & **Foreman-Mackey, Daniel**, 2018, *[Data Analysis
Recipes: Using Markov Chain Monte
Carlo](http://dx.doi.org/10.3847/1538-4365/aab76e)*, The Astrophysical
Journal Supplement Series, **236**, 11
([arXiv:1710.06068](http://arxiv.org/abs/1710.06068)) \[[188
([arXiv:1710.06068](http://arxiv.org/abs/1710.06068)) \[[189
citations](https://ui.adsabs.harvard.edu/abs/2018ApJS..236...11H)\]

Angus, Ruth; Morton, Timothy; Aigrain, Suzanne; **Foreman-Mackey,
Expand Down Expand Up @@ -858,7 +858,7 @@ citations](https://ui.adsabs.harvard.edu/abs/2013AJ....146....7B)\]
Jonathan, 2013, *[emcee: The MCMC
Hammer](http://dx.doi.org/10.1086/670067)*, Publications of the
Astronomical Society of the Pacific, **125**, 306
([arXiv:1202.3665](http://arxiv.org/abs/1202.3665)) \[[9313
([arXiv:1202.3665](http://arxiv.org/abs/1202.3665)) \[[9312
citations](https://ui.adsabs.harvard.edu/abs/2013PASP..125..306F)\]

Weisz, Daniel R.; Fouesneau, Morgan; Hogg, David W.; Rix, Hans-Walter;
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97 changes: 41 additions & 56 deletions data/pubs.json
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"Price-Whelan, Adrian M.",
"Savel, Arjun B."
],
"citations": 122,
"citations": 212,
"doctype": "software",
"doi": "10.5281/zenodo.1998447",
"page": null,
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"volume": null,
"year": "2023"
},
{
"arxiv": null,
"authors": [
"Price-Whelan, Adrian",
"Sip{\\'{o}}cz, Brigitta",
"Wagg, Tom",
"Lilleengen, Sophia",
"Starkman, Nathaniel",
"NGC",
"Lenz, Daniel",
"Greco, Johnny",
"Akeemlh",
"Foreman-Mackey, Dan",
"HNLala",
"Lim, P. L.",
"Oh, Semyeong",
"Koposov, Sergey",
"Li, Zhaozhou"
],
"citations": 1,
"doctype": "software",
"doi": "10.5281/zenodo.8217584",
"page": null,
"pub": "Zenodo",
"pubdate": "2023-08-05",
"title": "adrn/gala: v1.7.1",
"url": "https://ui.adsabs.harvard.edu/abs/2023zndo...8217584P",
"volume": null,
"year": "2023"
},
{
"arxiv": "2209.08940",
"authors": [
Expand Down Expand Up @@ -716,51 +746,6 @@
"volume": "166",
"year": "2023"
},
{
"arxiv": null,
"authors": [
"Koposov, Sergey",
"Speagle, Josh",
"Barbary, Kyle",
"Ashton, Gregory",
"Bennett, Ed",
"Buchner, Johannes",
"Scheffler, Carl",
"Cook, Ben",
"Talbot, Colm",
"Guillochon, James",
"Cubillos, Patricio",
"Asensio Ramos, Andr{\\'e}s",
"Johnson, Ben",
"Lang, Dustin",
"Ilya",
"Dartiailh, Matthieu",
"Nitz, Alex",
"McCluskey, Andrew",
"Archibald, Anne",
"Deil, Christoph",
"Foreman-Mackey, Dan",
"Goldstein, Danny",
"Tollerud, Erik",
"Leja, Joel",
"Kirk, Matthew",
"Pitkin, Matt",
"Sheehan, Patrick",
"Cargile, Phillip",
"Patel, Ruskin",
"Angus, Ruth"
],
"citations": 15,
"doctype": "software",
"doi": "10.5281/zenodo.7995596",
"page": null,
"pub": "Zenodo",
"pubdate": "2023-06-01",
"title": "joshspeagle/dynesty: v2.1.2",
"url": "https://ui.adsabs.harvard.edu/abs/2023zndo...7995596K",
"volume": null,
"year": "2023"
},
{
"arxiv": "2305.00988",
"authors": [
Expand Down Expand Up @@ -991,7 +976,7 @@
"Patel, Ruskin",
"Angus, Ruth"
],
"citations": 12,
"citations": 17,
"doctype": "software",
"doi": "10.5281/zenodo.7600689",
"page": null,
Expand Down Expand Up @@ -1300,7 +1285,7 @@
"Ruskin23",
"Angus, Ruth"
],
"citations": 15,
"citations": 14,
"doctype": "software",
"doi": "10.5281/zenodo.7388523",
"page": null,
Expand Down Expand Up @@ -1330,7 +1315,7 @@
"Koposov, Sergey",
"Major, Syrtis"
],
"citations": 10,
"citations": 7,
"doctype": "software",
"doi": "10.5281/zenodo.7299506",
"page": null,
Expand Down Expand Up @@ -1579,7 +1564,7 @@
"Leung, Henry",
"Scott, Spencer"
],
"citations": 4,
"citations": 3,
"doctype": "software",
"doi": "10.5281/zenodo.7113363",
"page": null,
Expand Down Expand Up @@ -2202,7 +2187,7 @@
"Koposov, Sergey",
"Major, Syrtis"
],
"citations": 6,
"citations": 5,
"doctype": "software",
"doi": "10.5281/zenodo.6325733",
"page": null,
Expand Down Expand Up @@ -5795,7 +5780,7 @@
"Hogg, David W.",
"Foreman-Mackey, Daniel"
],
"citations": 188,
"citations": 189,
"doctype": "article",
"doi": "10.3847/1538-4365/aab76e",
"page": 11,
Expand Down Expand Up @@ -7400,7 +7385,7 @@
"Sick, Jonathan",
"Johnson, Ben"
],
"citations": 218,
"citations": 132,
"doctype": "software",
"doi": "10.5281/zenodo.12157",
"page": null,
Expand Down Expand Up @@ -7471,7 +7456,7 @@
"Hogg, David W.",
"Brewer, Brendon J."
],
"citations": 44,
"citations": 51,
"doctype": "software",
"doi": "10.5281/zenodo.11020",
"page": null,
Expand Down Expand Up @@ -7626,7 +7611,7 @@
"Lang, Dustin",
"Goodman, Jonathan"
],
"citations": 9313,
"citations": 9312,
"doctype": "article",
"doi": "10.1086/670067",
"page": 306,
Expand All @@ -7650,7 +7635,7 @@
"Sanders, Jeremy",
"Zuntz, Joe"
],
"citations": 114,
"citations": 115,
"doctype": "software",
"doi": null,
"page": null,
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8 changes: 4 additions & 4 deletions data/repos.json
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"description": "Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more",
"url": "https://github.com/google/jax",
"homepageUrl": "http://jax.readthedocs.io/",
"forkCount": 2693,
"forkCount": 2696,
"stargazers": {
"totalCount": 29524
"totalCount": 29557
},
"watchers": {
"totalCount": 324
"totalCount": 325
}
}
},
Expand All @@ -40,7 +40,7 @@
"description": "The Python ensemble sampling toolkit for affine-invariant MCMC",
"url": "https://github.com/dfm/emcee",
"homepageUrl": "https://emcee.readthedocs.io",
"forkCount": 432,
"forkCount": 431,
"stargazers": {
"totalCount": 1450
},
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4 changes: 2 additions & 2 deletions tex/pubs_ref.tex
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Expand Up @@ -138,7 +138,7 @@

\item[{\color{numcolor}\scriptsize35}] Teague, Richard; Bae, Jaehan; Bergin, Edwin A.; Birnstiel, Tilman; \& \textbf{Foreman-Mackey, Daniel}, 2018, \doi{10.3847/2041-8213/aac6d7}{A Kinematical Detection of Two Embedded Jupiter-mass Planets in HD 163296}, The Astrophysical Journal, \textbf{860} (\arxiv{1805.10290}) [\href{https://ui.adsabs.harvard.edu/abs/2018ApJ...860L..12T}{253 citations}]

\item[{\color{numcolor}\scriptsize34}] Hogg, David W.; \& \textbf{Foreman-Mackey, Daniel}, 2018, \doi{10.3847/1538-4365/aab76e}{Data Analysis Recipes: Using Markov Chain Monte Carlo}, The Astrophysical Journal Supplement Series, \textbf{236}, 11 (\arxiv{1710.06068}) [\href{https://ui.adsabs.harvard.edu/abs/2018ApJS..236...11H}{188 citations}]
\item[{\color{numcolor}\scriptsize34}] Hogg, David W.; \& \textbf{Foreman-Mackey, Daniel}, 2018, \doi{10.3847/1538-4365/aab76e}{Data Analysis Recipes: Using Markov Chain Monte Carlo}, The Astrophysical Journal Supplement Series, \textbf{236}, 11 (\arxiv{1710.06068}) [\href{https://ui.adsabs.harvard.edu/abs/2018ApJS..236...11H}{189 citations}]

\item[{\color{numcolor}\scriptsize33}] Angus, Ruth; Morton, Timothy; Aigrain, Suzanne; \textbf{Foreman-Mackey, Daniel}; \& Rajpaul, Vinesh, 2018, \doi{10.1093/mnras/stx2109}{Inferring probabilistic stellar rotation periods using Gaussian processes}, Monthly Notices of the Royal Astronomical Society, \textbf{474}, 2094 (\arxiv{1706.05459}) [\href{https://ui.adsabs.harvard.edu/abs/2018MNRAS.474.2094A}{170 citations}]

Expand Down Expand Up @@ -202,6 +202,6 @@

\item[{\color{numcolor}\scriptsize3}] Brewer, Brendon J.; \textbf{Foreman-Mackey, Daniel}; \& Hogg, David W., 2013, \doi{10.1088/0004-6256/146/1/7}{Probabilistic Catalogs for Crowded Stellar Fields}, The Astronomical Journal, \textbf{146}, 7 (\arxiv{1211.5805}) [\href{https://ui.adsabs.harvard.edu/abs/2013AJ....146....7B}{40 citations}]

\item[{\color{numcolor}\scriptsize2}] \textbf{Foreman-Mackey, Daniel}; Hogg, David W.; Lang, Dustin; \& Goodman, Jonathan, 2013, \doi{10.1086/670067}{emcee: The MCMC Hammer}, Publications of the Astronomical Society of the Pacific, \textbf{125}, 306 (\arxiv{1202.3665}) [\href{https://ui.adsabs.harvard.edu/abs/2013PASP..125..306F}{9313 citations}]
\item[{\color{numcolor}\scriptsize2}] \textbf{Foreman-Mackey, Daniel}; Hogg, David W.; Lang, Dustin; \& Goodman, Jonathan, 2013, \doi{10.1086/670067}{emcee: The MCMC Hammer}, Publications of the Astronomical Society of the Pacific, \textbf{125}, 306 (\arxiv{1202.3665}) [\href{https://ui.adsabs.harvard.edu/abs/2013PASP..125..306F}{9312 citations}]

\item[{\color{numcolor}\scriptsize1}] Weisz, Daniel R.; Fouesneau, Morgan; Hogg, David W.; Rix, Hans-Walter; \etal\ (incl.\ \textbf{DFM}), 2013, \doi{10.1088/0004-637X/762/2/123}{The Panchromatic Hubble Andromeda Treasury. IV. A Probabilistic Approach to Inferring the High-mass Stellar Initial Mass Function and Other Power-law Functions}, The Astrophysical Journal, \textbf{762}, 123 (\arxiv{1211.6105}) [\href{https://ui.adsabs.harvard.edu/abs/2013ApJ...762..123W}{34 citations}]
2 changes: 1 addition & 1 deletion tex/pubs_select.tex
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\item[{\color{numcolor}\scriptsize2}] Ambikasaran, Sivaram; \textbf{Foreman-Mackey, Daniel}; Greengard, Leslie; Hogg, David W.; \& O'Neil, Michael, 2016, \doi{10.1109/TPAMI.2015.2448083}{Fast Direct Methods for Gaussian Processes}, IEEE Transactions on Pattern Analysis and Machine Intelligence, \textbf{38}, 252 (\arxiv{1403.6015}) [\href{https://scholar.google.com/scholar?cites=7122560326210979193,5194420368165307096,3347404430934682534}{668 citations}]

\item[{\color{numcolor}\scriptsize1}] \textbf{Foreman-Mackey, Daniel}; Hogg, David W.; Lang, Dustin; \& Goodman, Jonathan, 2013, \doi{10.1086/670067}{emcee: The MCMC Hammer}, Publications of the Astronomical Society of the Pacific, \textbf{125}, 306 (\arxiv{1202.3665}) [\href{https://ui.adsabs.harvard.edu/abs/2013PASP..125..306F}{9313 citations}]
\item[{\color{numcolor}\scriptsize1}] \textbf{Foreman-Mackey, Daniel}; Hogg, David W.; Lang, Dustin; \& Goodman, Jonathan, 2013, \doi{10.1086/670067}{emcee: The MCMC Hammer}, Publications of the Astronomical Society of the Pacific, \textbf{125}, 306 (\arxiv{1202.3665}) [\href{https://ui.adsabs.harvard.edu/abs/2013PASP..125..306F}{9312 citations}]
2 changes: 1 addition & 1 deletion tex/pubs_summary.tex
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@@ -1 +1 @@
refereed: 104 / first author: 9 / citations: 20,831 / h-index: 46 (2024-08-19)
refereed: 104 / first author: 9 / citations: 20,831 / h-index: 46 (2024-08-20)
2 changes: 1 addition & 1 deletion tex/pubs_summary_macros.tex
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\newcommand{\pubsdate}{2024-08-19}
\newcommand{\pubsdate}{2024-08-20}
\newcommand{\pubsnumber}{104}
\newcommand{\pubscitations}{20,831}
\newcommand{\pubshindex}{46}
4 changes: 2 additions & 2 deletions tex/repos.tex
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@@ -1,10 +1,10 @@
\item \href{https://github.com/google/jax}{{\bf jax}} --- 29524 stars / 2693 forks \\
\item \href{https://github.com/google/jax}{{\bf jax}} --- 29557 stars / 2696 forks \\
Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more \href{http://jax.readthedocs.io/}{[docs]}

\item \href{https://github.com/dfm/tinygp}{{\bf tinygp}} --- 283 stars / 23 forks \\
The tiniest of Gaussian Process libraries \href{https://tinygp.readthedocs.io}{[docs]}

\item \href{https://github.com/dfm/emcee}{{\bf emcee}} --- 1450 stars / 432 forks \\
\item \href{https://github.com/dfm/emcee}{{\bf emcee}} --- 1450 stars / 431 forks \\
The Python ensemble sampling toolkit for affine-invariant MCMC \href{https://emcee.readthedocs.io}{[docs]}

\item \href{https://github.com/dfm/corner.py}{{\bf corner.py}} --- 509 stars / 228 forks \\
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