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18 changes: 9 additions & 9 deletions README.md
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Expand Up @@ -45,7 +45,7 @@ Sagan Postdoctoral Fellow, University of Washington, 2015–2017.
<div class="list">


[**tinygp**](https://github.com/dfm/tinygp)227 stars / 19 forks
[**tinygp**](https://github.com/dfm/tinygp)228 stars / 19 forks
The tiniest of Gaussian Process libraries
[\[docs\]](https://tinygp.readthedocs.io)

Expand All @@ -68,16 +68,16 @@ Make some beautiful corner plots
Fast & scalable MCMC for all your exoplanet needs!
[\[docs\]](https://docs.exoplanet.codes)

[**daft**](https://github.com/daft-dev/daft)658 stars / 118 forks
[**daft**](https://github.com/daft-dev/daft)657 stars / 118 forks
Render probabilistic graphical models using matplotlib
[\[docs\]](https://docs.daft-pgm.org)

</div>

## Publications

refereed: 96 / first author: 9 / citations: 16,176 / h-index: 43
(2023-08-06)
refereed: 96 / first author: 9 / citations: 16,182 / h-index: 43
(2023-08-07)

### Refereed publications

Expand Down Expand Up @@ -171,7 +171,7 @@ Sustaining and Growing a Community-oriented Open-source Project and the
Latest Major Release (v5.0) of the Core
Package](http://dx.doi.org/10.3847/1538-4357/ac7c74)*, The Astrophysical
Journal, **935**, 167
([arXiv:2206.14220](http://arxiv.org/abs/2206.14220)) \[[478
([arXiv:2206.14220](http://arxiv.org/abs/2206.14220)) \[[479
citations](https://ui.adsabs.harvard.edu/abs/2022ApJ...935..167A)\]

Angus, Ruth; Price-Whelan, Adrian M.; Zinn, Joel C.; Bedell, Megan;
Expand Down Expand Up @@ -496,7 +496,7 @@ Luger, Rodrigo; Agol, Eric; **Foreman-Mackey, Daniel**; Fleming, David
P.; *et al.*, 2019, *[starry: Analytic Occultation Light
Curves](http://dx.doi.org/10.3847/1538-3881/aae8e5)*, The Astronomical
Journal, **157**, 64
([arXiv:1810.06559](http://arxiv.org/abs/1810.06559)) \[[185
([arXiv:1810.06559](http://arxiv.org/abs/1810.06559)) \[[186
citations](https://ui.adsabs.harvard.edu/abs/2019AJ....157...64L)\]

Van Eylen, Vincent; Albrecht, Simon; Huang, Xu; MacDonald, Mariah G.;
Expand Down Expand Up @@ -578,7 +578,7 @@ Ruth, 2017, *[Fast and Scalable Gaussian Process Modeling with
Applications to Astronomical Time
Series](http://dx.doi.org/10.3847/1538-3881/aa9332)*, The Astronomical
Journal, **154**, 220
([arXiv:1703.09710](http://arxiv.org/abs/1703.09710)) \[[517
([arXiv:1703.09710](http://arxiv.org/abs/1703.09710)) \[[518
citations](https://ui.adsabs.harvard.edu/abs/2017AJ....154..220F)\]

Montet, Benjamin T.; Tovar, Guadalupe; & **Foreman-Mackey, Daniel**,
Expand Down Expand Up @@ -791,7 +791,7 @@ citations](https://ui.adsabs.harvard.edu/abs/2013AJ....146....7B)\]
Jonathan, 2013, *[emcee: The MCMC
Hammer](http://dx.doi.org/10.1086/670067)*, Publications of the
Astronomical Society of the Pacific, **125**, 306
([arXiv:1202.3665](http://arxiv.org/abs/1202.3665)) \[[7665
([arXiv:1202.3665](http://arxiv.org/abs/1202.3665)) \[[7667
citations](https://ui.adsabs.harvard.edu/abs/2013PASP..125..306F)\]

Weisz, Daniel R.; Fouesneau, Morgan; Hogg, David W.; Rix, Hans-Walter;
Expand Down Expand Up @@ -875,7 +875,7 @@ Barnes, Rory; Deitrick, Russell; Luger, Rodrigo; Driscoll, Peter E.;
*et al.* (incl. **DFM**), 2016, *[The Habitability of Proxima Centauri b
I: Evolutionary
Scenarios](http://dx.doi.org/10.48550/arXiv.1608.06919)*, ArXiv
([arXiv:1608.06919](http://arxiv.org/abs/1608.06919)) \[[60
([arXiv:1608.06919](http://arxiv.org/abs/1608.06919)) \[[61
citations](https://ui.adsabs.harvard.edu/abs/2016arXiv160806919B)\]

Montet, Benjamin T.; Angus, Ruth; Barclay, Tom; Dawson, Rebekah;
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12 changes: 6 additions & 6 deletions data/pubs.json
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"Zonca, Andrea",
"Astropy Project Contributors"
],
"citations": 478,
"citations": 479,
"doctype": "article",
"doi": "10.3847/1538-4357/ac7c74",
"page": 167,
Expand Down Expand Up @@ -4404,7 +4404,7 @@
"Lustig-Yaeger, Jacob",
"Deitrick, Russell"
],
"citations": 185,
"citations": 186,
"doctype": "article",
"doi": "10.3847/1538-3881/aae8e5",
"page": 64,
Expand Down Expand Up @@ -5035,7 +5035,7 @@
"Ambikasaran, Sivaram",
"Angus, Ruth"
],
"citations": 517,
"citations": 518,
"doctype": "article",
"doi": "10.3847/1538-3881/aa9332",
"page": 220,
Expand Down Expand Up @@ -5807,7 +5807,7 @@
"Lustig-Yaeger, Jacob",
"Schwieterman, Eddie"
],
"citations": 60,
"citations": 61,
"doctype": "eprint",
"doi": "10.48550/arXiv.1608.06919",
"page": null,
Expand Down Expand Up @@ -6281,7 +6281,7 @@
"Hogg, David W.",
"O'Neil, Michael"
],
"citations": 403,
"citations": 404,
"doctype": "article",
"doi": "10.1109/TPAMI.2015.2448083",
"page": 252,
Expand Down Expand Up @@ -6779,7 +6779,7 @@
"Lang, Dustin",
"Goodman, Jonathan"
],
"citations": 7665,
"citations": 7667,
"doctype": "article",
"doi": "10.1086/670067",
"page": 306,
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4 changes: 2 additions & 2 deletions data/repos.json
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"homepageUrl": "https://tinygp.readthedocs.io",
"forkCount": 19,
"stargazers": {
"totalCount": 227
"totalCount": 228
},
"watchers": {
"totalCount": 8
Expand Down Expand Up @@ -87,7 +87,7 @@
"homepageUrl": "https://docs.daft-pgm.org",
"forkCount": 118,
"stargazers": {
"totalCount": 658
"totalCount": 657
},
"watchers": {
"totalCount": 17
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8 changes: 4 additions & 4 deletions tex/pubs_ref.tex
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\item[{\color{numcolor}\scriptsize86}] Farrell, Eoin; Jermyn, Adam S.; Cantiello, Matteo; \& \textbf{Foreman-Mackey, Daniel}, 2022, \doi{10.3847/1538-4357/ac8423}{The Initial Magnetic Field Distribution in AB Stars}, The Astrophysical Journal, \textbf{938}, 10 (\arxiv{2210.11180}) [\href{https://ui.adsabs.harvard.edu/abs/2022ApJ...938...10F}{3 citations}]

\item[{\color{numcolor}\scriptsize85}] Astropy Collaboration; Price-Whelan, Adrian M.; Lim, Pey Lian; Earl, Nicholas; \etal\ (incl.\ \textbf{DFM}), 2022, \doi{10.3847/1538-4357/ac7c74}{The Astropy Project: Sustaining and Growing a Community-oriented Open-source Project and the Latest Major Release (v5.0) of the Core Package}, The Astrophysical Journal, \textbf{935}, 167 (\arxiv{2206.14220}) [\href{https://ui.adsabs.harvard.edu/abs/2022ApJ...935..167A}{478 citations}]
\item[{\color{numcolor}\scriptsize85}] Astropy Collaboration; Price-Whelan, Adrian M.; Lim, Pey Lian; Earl, Nicholas; \etal\ (incl.\ \textbf{DFM}), 2022, \doi{10.3847/1538-4357/ac7c74}{The Astropy Project: Sustaining and Growing a Community-oriented Open-source Project and the Latest Major Release (v5.0) of the Core Package}, The Astrophysical Journal, \textbf{935}, 167 (\arxiv{2206.14220}) [\href{https://ui.adsabs.harvard.edu/abs/2022ApJ...935..167A}{479 citations}]

\item[{\color{numcolor}\scriptsize84}] Angus, Ruth; Price-Whelan, Adrian M.; Zinn, Joel C.; Bedell, Megan; \etal\ (incl.\ \textbf{DFM}), 2022, \doi{10.3847/1538-3881/ac6fea}{The 3D Galactocentric Velocities of Kepler Stars: Marginalizing Over Missing Radial Velocities}, The Astronomical Journal, \textbf{164}, 25 (\arxiv{2205.08901})

Expand Down Expand Up @@ -106,7 +106,7 @@

\item[{\color{numcolor}\scriptsize43}] Siemiginowska, Aneta; Eadie, Gwendolyn; Czekala, Ian; Feigelson, Eric; \etal\ (incl.\ \textbf{DFM}), 2019, \doi{10.48550/arXiv.1903.06796}{The Next Decade of Astroinformatics and Astrostatistics}, Bulletin of the American Astronomical Society, \textbf{51}, 355 (\arxiv{1903.06796}) [\href{https://ui.adsabs.harvard.edu/abs/2019BAAS...51c.355S}{5 citations}]

\item[{\color{numcolor}\scriptsize42}] Luger, Rodrigo; Agol, Eric; \textbf{Foreman-Mackey, Daniel}; Fleming, David P.; \etal, 2019, \doi{10.3847/1538-3881/aae8e5}{starry: Analytic Occultation Light Curves}, The Astronomical Journal, \textbf{157}, 64 (\arxiv{1810.06559}) [\href{https://ui.adsabs.harvard.edu/abs/2019AJ....157...64L}{185 citations}]
\item[{\color{numcolor}\scriptsize42}] Luger, Rodrigo; Agol, Eric; \textbf{Foreman-Mackey, Daniel}; Fleming, David P.; \etal, 2019, \doi{10.3847/1538-3881/aae8e5}{starry: Analytic Occultation Light Curves}, The Astronomical Journal, \textbf{157}, 64 (\arxiv{1810.06559}) [\href{https://ui.adsabs.harvard.edu/abs/2019AJ....157...64L}{186 citations}]

\item[{\color{numcolor}\scriptsize41}] Van Eylen, Vincent; Albrecht, Simon; Huang, Xu; MacDonald, Mariah G.; \etal\ (incl.\ \textbf{DFM}), 2019, \doi{10.3847/1538-3881/aaf22f}{The Orbital Eccentricity of Small Planet Systems}, The Astronomical Journal, \textbf{157}, 61 (\arxiv{1807.00549}) [\href{https://ui.adsabs.harvard.edu/abs/2019AJ....157...61V}{147 citations}]

Expand All @@ -128,7 +128,7 @@

\item[{\color{numcolor}\scriptsize32}] \textbf{Foreman-Mackey, Daniel}, 2018, \doi{10.3847/2515-5172/aaaf6c}{Scalable Backpropagation for Gaussian Processes using Celerite}, Research Notes of the American Astronomical Society, \textbf{2}, 31 (\arxiv{1801.10156}) [\href{https://ui.adsabs.harvard.edu/abs/2018RNAAS...2...31F}{116 citations}]

\item[{\color{numcolor}\scriptsize31}] \textbf{Foreman-Mackey, Daniel}; Agol, Eric; Ambikasaran, Sivaram; \& Angus, Ruth, 2017, \doi{10.3847/1538-3881/aa9332}{Fast and Scalable Gaussian Process Modeling with Applications to Astronomical Time Series}, The Astronomical Journal, \textbf{154}, 220 (\arxiv{1703.09710}) [\href{https://ui.adsabs.harvard.edu/abs/2017AJ....154..220F}{517 citations}]
\item[{\color{numcolor}\scriptsize31}] \textbf{Foreman-Mackey, Daniel}; Agol, Eric; Ambikasaran, Sivaram; \& Angus, Ruth, 2017, \doi{10.3847/1538-3881/aa9332}{Fast and Scalable Gaussian Process Modeling with Applications to Astronomical Time Series}, The Astronomical Journal, \textbf{154}, 220 (\arxiv{1703.09710}) [\href{https://ui.adsabs.harvard.edu/abs/2017AJ....154..220F}{518 citations}]

\item[{\color{numcolor}\scriptsize30}] Montet, Benjamin T.; Tovar, Guadalupe; \& \textbf{Foreman-Mackey, Daniel}, 2017, \doi{10.3847/1538-4357/aa9e00}{Long-term Photometric Variability in Kepler Full-frame Images: Magnetic Cycles of Sun-like Stars}, The Astrophysical Journal, \textbf{851}, 116 (\arxiv{1705.07928}) [\href{https://ui.adsabs.harvard.edu/abs/2017ApJ...851..116M}{73 citations}]

Expand Down Expand Up @@ -186,6 +186,6 @@

\item[{\color{numcolor}\scriptsize3}] Brewer, Brendon J.; \textbf{Foreman-Mackey, Daniel}; \& Hogg, David W., 2013, \doi{10.1088/0004-6256/146/1/7}{Probabilistic Catalogs for Crowded Stellar Fields}, The Astronomical Journal, \textbf{146}, 7 (\arxiv{1211.5805}) [\href{https://ui.adsabs.harvard.edu/abs/2013AJ....146....7B}{39 citations}]

\item[{\color{numcolor}\scriptsize2}] \textbf{Foreman-Mackey, Daniel}; Hogg, David W.; Lang, Dustin; \& Goodman, Jonathan, 2013, \doi{10.1086/670067}{emcee: The MCMC Hammer}, Publications of the Astronomical Society of the Pacific, \textbf{125}, 306 (\arxiv{1202.3665}) [\href{https://ui.adsabs.harvard.edu/abs/2013PASP..125..306F}{7665 citations}]
\item[{\color{numcolor}\scriptsize2}] \textbf{Foreman-Mackey, Daniel}; Hogg, David W.; Lang, Dustin; \& Goodman, Jonathan, 2013, \doi{10.1086/670067}{emcee: The MCMC Hammer}, Publications of the Astronomical Society of the Pacific, \textbf{125}, 306 (\arxiv{1202.3665}) [\href{https://ui.adsabs.harvard.edu/abs/2013PASP..125..306F}{7667 citations}]

\item[{\color{numcolor}\scriptsize1}] Weisz, Daniel R.; Fouesneau, Morgan; Hogg, David W.; Rix, Hans-Walter; \etal\ (incl.\ \textbf{DFM}), 2013, \doi{10.1088/0004-637X/762/2/123}{The Panchromatic Hubble Andromeda Treasury. IV. A Probabilistic Approach to Inferring the High-mass Stellar Initial Mass Function and Other Power-law Functions}, The Astrophysical Journal, \textbf{762}, 123 (\arxiv{1211.6105}) [\href{https://ui.adsabs.harvard.edu/abs/2013ApJ...762..123W}{31 citations}]
4 changes: 2 additions & 2 deletions tex/pubs_select.tex
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\item[{\color{numcolor}\scriptsize6}] \textbf{Foreman-Mackey, Daniel}; Farr, Will; Sinha, Manodeep; Archibald, Anne; \etal, 2019, \doi{10.21105/joss.01864}{emcee v3: A Python ensemble sampling toolkit for affine-invariant MCMC}, The Journal of Open Source Software, \textbf{4}, 1864 (\arxiv{1911.07688}) [\href{https://ui.adsabs.harvard.edu/abs/2019JOSS....4.1864F}{142 citations}]

\item[{\color{numcolor}\scriptsize5}] \textbf{Foreman-Mackey, Daniel}; Agol, Eric; Ambikasaran, Sivaram; \& Angus, Ruth, 2017, \doi{10.3847/1538-3881/aa9332}{Fast and Scalable Gaussian Process Modeling with Applications to Astronomical Time Series}, The Astronomical Journal, \textbf{154}, 220 (\arxiv{1703.09710}) [\href{https://ui.adsabs.harvard.edu/abs/2017AJ....154..220F}{517 citations}]
\item[{\color{numcolor}\scriptsize5}] \textbf{Foreman-Mackey, Daniel}; Agol, Eric; Ambikasaran, Sivaram; \& Angus, Ruth, 2017, \doi{10.3847/1538-3881/aa9332}{Fast and Scalable Gaussian Process Modeling with Applications to Astronomical Time Series}, The Astronomical Journal, \textbf{154}, 220 (\arxiv{1703.09710}) [\href{https://ui.adsabs.harvard.edu/abs/2017AJ....154..220F}{518 citations}]

\item[{\color{numcolor}\scriptsize4}] \textbf{Foreman-Mackey, Daniel}; Morton, Timothy D.; Hogg, David W.; Agol, Eric; \& Sch{\"o}lkopf, Bernhard, 2016, \doi{10.3847/0004-6256/152/6/206}{The Population of Long-period Transiting Exoplanets}, The Astronomical Journal, \textbf{152}, 206 (\arxiv{1607.08237}) [\href{https://ui.adsabs.harvard.edu/abs/2016AJ....152..206F}{80 citations}]

\item[{\color{numcolor}\scriptsize3}] \textbf{Foreman-Mackey, Daniel}, 2016, \doi{10.21105/joss.00024}{corner.py: Scatterplot matrices in Python}, The Journal of Open Source Software, \textbf{1}, 2 [\href{https://scholar.google.com/scholar?cites=1835087844145558435,17325274697099535179,14220488595059618709,12820425635803494730,7284810048757141243,17415935839493019063}{1700 citations}]

\item[{\color{numcolor}\scriptsize2}] Ambikasaran, Sivaram; \textbf{Foreman-Mackey, Daniel}; Greengard, Leslie; Hogg, David W.; \& O'Neil, Michael, 2016, \doi{10.1109/TPAMI.2015.2448083}{Fast Direct Methods for Gaussian Processes}, IEEE Transactions on Pattern Analysis and Machine Intelligence, \textbf{38}, 252 (\arxiv{1403.6015}) [\href{https://scholar.google.com/scholar?cites=7122560326210979193,5194420368165307096,3347404430934682534}{627 citations}]

\item[{\color{numcolor}\scriptsize1}] \textbf{Foreman-Mackey, Daniel}; Hogg, David W.; Lang, Dustin; \& Goodman, Jonathan, 2013, \doi{10.1086/670067}{emcee: The MCMC Hammer}, Publications of the Astronomical Society of the Pacific, \textbf{125}, 306 (\arxiv{1202.3665}) [\href{https://ui.adsabs.harvard.edu/abs/2013PASP..125..306F}{7665 citations}]
\item[{\color{numcolor}\scriptsize1}] \textbf{Foreman-Mackey, Daniel}; Hogg, David W.; Lang, Dustin; \& Goodman, Jonathan, 2013, \doi{10.1086/670067}{emcee: The MCMC Hammer}, Publications of the Astronomical Society of the Pacific, \textbf{125}, 306 (\arxiv{1202.3665}) [\href{https://ui.adsabs.harvard.edu/abs/2013PASP..125..306F}{7667 citations}]
2 changes: 1 addition & 1 deletion tex/pubs_summary.tex
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@@ -1 +1 @@
refereed: 96 / first author: 9 / citations: 16,176 / h-index: 43 (2023-08-06)
refereed: 96 / first author: 9 / citations: 16,182 / h-index: 43 (2023-08-07)
2 changes: 1 addition & 1 deletion tex/pubs_unref.tex
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\item[{\color{numcolor}\scriptsize4}] Wang, Dun; Hogg, David W.; \textbf{Foreman-Mackey, Daniel}; \& Sch{\"o}lkopf, Bernhard, 2017, \doi{10.48550/arXiv.1710.02428}{A pixel-level model for event discovery in time-domain imaging}, ArXiv (\arxiv{1710.02428}) [\href{https://ui.adsabs.harvard.edu/abs/2017arXiv171002428W}{11 citations}]

\item[{\color{numcolor}\scriptsize3}] Barnes, Rory; Deitrick, Russell; Luger, Rodrigo; Driscoll, Peter E.; \etal\ (incl.\ \textbf{DFM}), 2016, \doi{10.48550/arXiv.1608.06919}{The Habitability of Proxima Centauri b I: Evolutionary Scenarios}, ArXiv (\arxiv{1608.06919}) [\href{https://ui.adsabs.harvard.edu/abs/2016arXiv160806919B}{60 citations}]
\item[{\color{numcolor}\scriptsize3}] Barnes, Rory; Deitrick, Russell; Luger, Rodrigo; Driscoll, Peter E.; \etal\ (incl.\ \textbf{DFM}), 2016, \doi{10.48550/arXiv.1608.06919}{The Habitability of Proxima Centauri b I: Evolutionary Scenarios}, ArXiv (\arxiv{1608.06919}) [\href{https://ui.adsabs.harvard.edu/abs/2016arXiv160806919B}{61 citations}]

\item[{\color{numcolor}\scriptsize2}] Montet, Benjamin T.; Angus, Ruth; Barclay, Tom; Dawson, Rebekah; \etal\ (incl.\ \textbf{DFM}), 2013, \doi{10.48550/arXiv.1309.0654}{Maximizing Kepler science return per telemetered pixel: Searching the habitable zones of the brightest stars}, ArXiv (\arxiv{1309.0654})

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4 changes: 2 additions & 2 deletions tex/repos.tex
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@@ -1,4 +1,4 @@
\item \href{https://github.com/dfm/tinygp}{{\bf tinygp}} --- 227 stars / 19 forks \\
\item \href{https://github.com/dfm/tinygp}{{\bf tinygp}} --- 228 stars / 19 forks \\
The tiniest of Gaussian Process libraries \href{https://tinygp.readthedocs.io}{[docs]}

\item \href{https://github.com/showyourwork/showyourwork}{{\bf showyourwork}} --- 461 stars / 38 forks \\
Expand All @@ -13,5 +13,5 @@
\item \href{https://github.com/exoplanet-dev/exoplanet}{{\bf exoplanet}} --- 187 stars / 49 forks \\
Fast {\&} scalable MCMC for all your exoplanet needs! \href{https://docs.exoplanet.codes}{[docs]}

\item \href{https://github.com/daft-dev/daft}{{\bf daft}} --- 658 stars / 118 forks \\
\item \href{https://github.com/daft-dev/daft}{{\bf daft}} --- 657 stars / 118 forks \\
Render probabilistic graphical models using matplotlib \href{https://docs.daft-pgm.org}{[docs]}

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