Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: conda-incubator/setup-miniconda@v2, actions/checkout@v2, r-lib/actions/[email protected], r-lib/actions/[email protected], actions/cache@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, r-lib/actions/[email protected], r-lib/actions/[email protected], actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/

unable to access index for repository https://bioconductor.org/packages/3.17/bioc/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/bioc/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/bioc/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/bioc/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.3:

unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.3:

this package has a non-empty 'configure.ucrt' file,