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Fixed another type in JOSS paper
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akaptano authored Jan 26, 2022
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Expand Up @@ -74,7 +74,7 @@ q_1(t_m) & q_2(t_m) & \cdots & q_n(t_m)
\end{bmatrix}
\label{Eq:DataMatrix}.
\end{eqnarray}
A matrix of derivatives in time, $\mathbf Q_t$, is defined similarly and can be numerically computed from $\mathbf{Q}$. PySINDy defaults to second order finite differences for computing derivatives, although a host of more sophisticated methods are now available, including arbitrary order finite differences, Savitzky-Galoy derivatives (i.e. polynomial-filtered derivatives), spectral derivatives with optional filters, arbitrary order spline derivatives, and total variational derivatives [@ahnert2007numerical;@chartrand2011numerical;@tibshirani2011solution].
A matrix of derivatives in time, $\mathbf Q_t$, is defined similarly and can be numerically computed from $\mathbf{Q}$. PySINDy defaults to second order finite differences for computing derivatives, although a host of more sophisticated methods are now available, including arbitrary order finite differences, Savitzky-Golay derivatives (i.e. polynomial-filtered derivatives), spectral derivatives with optional filters, arbitrary order spline derivatives, and total variational derivatives [@ahnert2007numerical;@chartrand2011numerical;@tibshirani2011solution].

After $\mathbf Q_t$ is obtained, Eq. \eqref{eq:sindy_expansion} becomes $\mathbf Q_t \approx \mathbf{\Theta}(\mathbf{Q})\mathbf{\Xi}$ and the goal of the SINDy sparse regression problem is to choose a sparse set of coefficients $\mathbf{\Xi}$ that accurately fits the measured data in $\mathbf Q_t$. We can promote sparsity in the identified coefficients via a sparse regularizer $R(\mathbf{\Xi})$, such as the $l_0$ or $l_1$ norm, and use a sparse regression algorithm such as SR3 [@champion2020unified] to solve the resulting optimization problem,
\begin{equation}\label{eq:sindy_regression}
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