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Releases: eastgenomics/egg5_dias_CEN_config

v1.2.1

16 Nov 13:38
@Aisha-D Aisha-D
v1.2.1
370a8f3
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v1.2.1

Update CNV caller app to v1.0.1
Update CNV reports workflow to v1.0.2
Update additional regions file to v1.0.1

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v1.2.0

05 Oct 10:00
@Aisha-D Aisha-D
v1.2.0
31f8a2d
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v1.2.0

Summary
New sections to allow CNV calling, CNV report and CNV reanalysis

Changes

  • Addition of CNV calling app ID, inputs to the CNV calling app and input file patterns
  • Addition of CNV reports workflow ID, stage IDs, reports and reanalysis dynamic files and stage input patterns

Contributors
@sophie22

Contributors

sophie22
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v1.1.5

11 Jul 15:40
@Yu-jinKim Yu-jinKim
v1.1.5
dda56f8
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v1.1.5

Changes

  • manually added NM_001031734.4 for FDX2 in:
    • exon file with HGNC ids project-Fkb6Gkj433GVVvj73J7x8KbV:file-GF611Z8433Gk7gZ47gypK7ZZ
    • exon file with symbols project-Fkb6Gkj433GVVvj73J7x8KbV:file-GF611Z8433Gf99pBPbJkV7bq
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v1.1.4

08 Jun 14:14
@Yu-jinKim Yu-jinKim
v1.1.4
d59765e
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v1.1.4
  • dias reports v2.0.4
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v1.1.3

31 May 16:06
@Yu-jinKim Yu-jinKim
v1.1.3
82abd46
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v1.1.3
  • dias_reports v2.0.3
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v1.1.2

30 May 13:14
@Yu-jinKim Yu-jinKim
v1.1.2
d1e4ac5
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v1.1.2
  • flank is now 495 for generate_bed_for_vep
  • dias_reports v2.0.2
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v1.1.1

27 May 12:57
@Yu-jinKim Yu-jinKim
v1.1.1
cb92973
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v1.1.1
  • new exon files
  • reports workflow v2.0.1
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v1.1.0

26 May 10:29
@Yu-jinKim Yu-jinKim
v1.1.0
a1725c4
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v1.1.0
  • version bump
  • new multiqc config: project-Fkb6Gkj433GVVvj73J7x8KbV:file-G82027Q433Gfx69zGvjq7PqQ
  • rename nirvana_genes2transcripts to genes2transcripts
  • new exon file: project-Fkb6Gkj433GVVvj73J7x8KbV:file-GB2Pk10433Gp62yK4Qk2yFXQ
  • stage ids:
    • generate_bed_vep_stage_id: stage-G9P8p104vyJJGy6y86FQBxkv
    • vep_stage_id: stage-G9Q0jzQ4vyJ3x37X4KBKXZ5v
    • generate_workbook_stage_id: stage-G9P8VQj4vyJBJ0kg50vzVPxY
    • generate_bed_athena_stage_id: stage-Fyq5yy0433GXxz691bKyvjPJ
  • vep config: project-Fkb6Gkj433GVVvj73J7x8KbV:file-GB69B1j43Vx9f0ZYGbKf9xQ1
  • new reports workflow: project-Fkb6Gkj433GVVvj73J7x8KbV:workflow-GB727K8433GxkG4XFy1k6KYq
Assets 2
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v1.0.2

12 Jan 14:59
@Yu-jinKim Yu-jinKim
v1.0.2
6689887
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v1.0.2

Changes

  • Use dias_reports workflow v1.3.3
Assets 2
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v1.0.1

07 Jan 13:39
@Aisha-D Aisha-D
v1.0.1
f1edc0e
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v1.0.1
  • Update reports workflow to v1.3.2
  • Add stage applet id for vcf_annotator

Fix

  • Detect NA12878-.*-EGG5 pattern in multi #3
Assets 2
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