DI-809 - fix upload of output file to job destination #62

	name: pytest
	on: [push, pull_request]

	jobs:
	build:
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v2
	- name: Set up Python 3.8
	uses: actions/setup-python@v1
	with:
	python-version: 3.8
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install pipenv codecov pytest pytest-cov pytest-mock pytest-subtests
	pip install -r requirements.txt
	pipenv install --dev
	- name: Install bedtools
	run: \|
	wget https://github.com/arq5x/bedtools2/releases/download/v2.31.0/bedtools.static -O bedtools
	chmod a+x bedtools
	sudo mv bedtools /usr/bin/bedtools

	bedtools
	- name: Test with pytest
	run: \|
	pytest -vv --cov .

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