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tso500_vep_config_v1.2.9.json -> tso500_vep_config_v1.2.10.json
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TSO500_vep_config file was renamed by using git mv to increase version in the filename (i.e. from v1.2.9 to v1.2.10). Within the file:
- config_version was updated from v1.2.9 to v1.2.10
- ClinVar files file_id and index_id were updated to point to the most recent ClinVar annotation files (file-Gq1Y1q04pZJXkF96B908F6JY and file-Gq1Y2P049Kp2Jq880x258qqG)
- README file was updated to point to the correct ClinVar files.
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Arun committed Aug 23, 2024
1 parent e6ccb52 commit 3b4fe39
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Showing 2 changed files with 4 additions and 4 deletions.
2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -21,7 +21,7 @@ This json file provides information about annotations,plugins, required fields a
* Homo_sapiens.GRCh37.dna.toplevel.fa.gz.gzi
* hs37d5.fasta-index.tar.gz
* Custom Annotation sources:
* clinvar_20240708_GRCh37.vcf.gz
* clinvar_20240813_GRCh37.vcf.gz
* gnomad.genomes.r2.0.1.sites.noVEP_normalised_decomposed_PASS.vcf.gz
* gnomad.exomes.r2.0.2.sites.noVEP_normalised_decomposed_PASS.vcf.gz
* Plugin annotations:
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Expand Up @@ -2,7 +2,7 @@
"config_information":{
"genome_build": "GRCh37",
"assay":"TSO500",
"config_version": "1.2.9"
"config_version": "1.2.10"
},
"vep_resources":{
"vep_docker":"file-G8V2Vz0433Gp5bYPF2f6vg9X",
Expand All @@ -23,8 +23,8 @@
"required_fields":"ClinVar,ClinVar_CLNSIG,ClinVar_CLNSIGCONF,ClinVar_CLNDN",
"resource_files": [
{
"file_id":"file-GpBQGV04bjFyff7J639Gf748",
"index_id":"file-GpBQKKj46v4qkxvQ92P7q2z6"
"file_id":"file-Gq1Y1q04pZJXkF96B908F6JY",
"index_id":"file-Gq1Y2P049Kp2Jq880x258qqG"
}
]
},
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