use packages from conda instead of pypi #1236
Workflow file for this run
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| name: Test | |
| on: | |
| push: { branches: [ "master" ] } | |
| pull_request: { branches: [ "master" ] } | |
| concurrency: | |
| group: test-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| python: ["3.9", "3.10", "3.11", "3.12"] | |
| os: ["ubuntu-latest", "macos-latest", "windows-latest"] | |
| source: ["conda", "pip"] | |
| steps: | |
| - name: checkout | |
| uses: actions/checkout@v3 | |
| with: { submodules: recursive } | |
| - name: setup conda environment | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| python-version: "${{ matrix.python }}" | |
| miniforge-variant: Mambaforge | |
| - name: install dependencies | |
| shell: bash -l {0} | |
| run: | | |
| mamba env update --quiet -n test -f environment.yml | |
| conda list | |
| if: ${{ matrix.source == 'conda' }} | |
| - name: install svgdigitizer | |
| shell: bash -l {0} | |
| run: | | |
| pip install --no-dependencies . | |
| if: ${{ matrix.source == 'conda' }} | |
| - name: install svgdigitizer | |
| shell: bash -l {0} | |
| run: | | |
| pip install . | |
| if: ${{ matrix.source == 'pip' }} | |
| - name: doctest | |
| shell: bash -l {0} | |
| run: | | |
| pytest --doctest-modules svgdigitizer | |
| if: ${{ matrix.source == 'conda' }} | |
| # Disable testing readme with byexample (see #187) | |
| # - name: byexample | |
| # shell: bash -l {0} | |
| # run: | | |
| # mamba install -y byexample | |
| # # byexample -l shell,python -o +norm-ws --timeout=30 README.md | |
| ## byexample is not available for Windows | |
| ## the exact numerical output of commands differs between Linux & macOS | |
| # if: ${{ matrix.os == 'ubuntu-latest' && matrix.source == 'conda' }} | |
| - name: cli-digitize-xy | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer digitize test/data/xy.svg | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/xy.csv"), pandas.read_csv("test/data/xy.csv.expected"))' | |
| - name: cli-digitize-scaling-factor | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer digitize test/data/scaling_factor.svg | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/scaling_factor.csv"), pandas.read_csv("test/data/scaling_factor.csv.expected"))' | |
| - name: cli-digitize-x_and_y_scale_bar | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer digitize test/data/x_and_y_scale_bar.svg | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/x_and_y_scale_bar.csv"), pandas.read_csv("test/data/x_and_y_scale_bar.csv.expected"))' | |
| - name: cli-digitize-sampling-interval | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer digitize test/data/sampling.svg --sampling-interval .00101 | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/sampling.csv"), pandas.read_csv("test/data/sampling.csv.expected"))' | |
| - name: cli-digitize-sampling-many-points | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer digitize test/data/sampling_many_points.svg --sampling-interval .001508 | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/sampling_many_points.csv"), pandas.read_csv("test/data/sampling_many_points.csv.expected"))' | |
| - name: cli-digitize-svg-without-layer | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer digitize test/data/svg_without_layer.svg | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/svg_without_layer.csv"), pandas.read_csv("test/data/svg_without_layer.csv.expected"))' | |
| - name: cli-cv-xy-rate | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer cv test/data/xy_rate.svg --metadata test/data/xy_rate.yaml --si-units | |
| git diff --no-index --word-diff -- test/data/xy_rate.json test/data/xy_rate.json.expected | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/xy_rate.csv"), pandas.read_csv("test/data/xy_rate.csv.expected"))' | |
| - name: cli-cv-xy-rate-without-metadata | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer cv test/data/xy_rate_without_metadata.svg --si-units | |
| git diff --no-index --word-diff -- test/data/xy_rate_without_metadata.json test/data/xy_rate_without_metadata.json.expected | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/xy_rate_without_metadata.csv"), pandas.read_csv("test/data/xy_rate_without_metadata.csv.expected"))' | |
| - name: cli-cv-xy-rate-reference | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer cv test/data/xy_rate_reference.svg --metadata test/data/xy_rate_reference.yaml --si-units | |
| git diff --no-index --word-diff -- test/data/xy_rate_reference.json test/data/xy_rate_reference.json.expected | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/xy_rate_reference.csv"), pandas.read_csv("test/data/xy_rate_reference.csv.expected"))' | |
| - name: cli-cv-cv-comment | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer cv test/data/cv_comment.svg --metadata test/data/cv_comment.yaml --si-units | |
| git diff --no-index --word-diff -- test/data/cv_comment.json test/data/cv_comment.json.expected | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/cv_comment.csv"), pandas.read_csv("test/data/cv_comment.csv.expected"))' | |
| - name: cli-cv-xy-rate-without-metadata-skewed | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer cv test/data/xy_rate_without_metadata_skewed.svg --skewed --si-units | |
| git diff --no-index --word-diff -- test/data/xy_rate_without_metadata_skewed.json test/data/xy_rate_without_metadata_skewed.json.expected | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/xy_rate_without_metadata_skewed.csv"), pandas.read_csv("test/data/xy_rate_without_metadata_skewed.csv.expected"))' | |
| - name: cli-cv-axes-orientation | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer cv test/data/axes_orientation.svg --si-units | |
| git diff --no-index --word-diff -- test/data/axes_orientation.json test/data/axes_orientation.json.expected | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/axes_orientation.csv"), pandas.read_csv("test/data/axes_orientation.csv.expected"))' | |
| - name: cli-cv-bibliography | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer cv test/data/cv_bibliography.svg --metadata test/data/cv_bibliography.yaml --si-units --bibliography | |
| git diff --no-index --word-diff -- test/data/cv_bibliography.json test/data/cv_bibliography.json.expected | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/cv_bibliography.csv"), pandas.read_csv("test/data/cv_bibliography.csv.expected"))' | |
| - name: cli-cv-package-no-bibliography | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer cv test/data/package_no_bibliography.svg --metadata test/data/package_no_bibliography.yaml --si-units --bibliography | |
| git diff --no-index --word-diff -- test/data/package_no_bibliography.json test/data/package_no_bibliography.json.expected | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/package_no_bibliography.csv"), pandas.read_csv("test/data/package_no_bibliography.csv.expected"))' | |
| - name: cli-figure-bibliography | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer figure test/data/figure_bibliography.svg --metadata test/data/figure_bibliography.yaml --si-units --bibliography | |
| git diff --no-index --word-diff -- test/data/figure_bibliography.json test/data/figure_bibliography.json.expected | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/figure_bibliography.csv"), pandas.read_csv("test/data/figure_bibliography.csv.expected"))' | |
| - name: cli-cv-package-no-bibliography | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer cv test/data/package_no_bibliography.svg --metadata test/data/package_no_bibliography.yaml --si-units --bibliography | |
| git diff --no-index --word-diff -- test/data/package_no_bibliography.json test/data/package_no_bibliography.json.expected | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/package_no_bibliography.csv"), pandas.read_csv("test/data/package_no_bibliography.csv.expected"))' | |
| - name: cli-cv-xy-rate-reference-no-si | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer cv test/data/xy_rate_reference_no_si.svg --metadata test/data/xy_rate_reference_no_si.yaml | |
| git diff --no-index --word-diff -- test/data/xy_rate_reference_no_si.json test/data/xy_rate_reference_no_si.json.expected | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/xy_rate_reference_no_si.csv"), pandas.read_csv("test/data/xy_rate_reference_no_si.csv.expected"))' | |
| - name: cli-figure-figure-comment | |
| shell: bash -l {0} | |
| run: | | |
| svgdigitizer figure test/data/figure_comment.svg --metadata test/data/figure_comment.yaml | |
| git diff --no-index --word-diff -- test/data/figure_comment.json test/data/figure_comment.json.expected | |
| python -c 'import pandas; pandas.testing.assert_frame_equal(pandas.read_csv("test/data/figure_comment.csv"), pandas.read_csv("test/data/figure_comment.csv.expected"))' |