make json dir #10
Workflow file for this run
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| # This workflow automatically generates all manifests currently specified by the data model | |
| # Outputs are excel files and json schemas | |
| # Runs AFTER changes to the data model have been reviewed in a PR and merged into main | |
| name: Store Current Manifests | |
| on: | |
| push: | |
| branches: schematic-228-template-workflow | |
| workflow_dispatch: | |
| concurrency: | |
| # cancel the current running workflow from the same branch, PR when a new workflow is triggered | |
| # when the trigger is not a PR but a push, it will use the commit sha to generate the concurrency group | |
| # {{ github.workflow }}: the workflow name is used to generate the concurrency group. This allows you to have more than one workflows | |
| # {{ github.ref_type }}: the type of Git ref object created in the repository. Can be either branch or tag | |
| # {{ github.event.pull_request.number}}: get PR number | |
| # {{ github.sha }}: full commit sha | |
| # credit: https://github.com/Sage-Bionetworks-Workflows/sagetasks/blob/main/.github/workflows/ci.yml | |
| group: >- | |
| ${{ github.workflow }}-${{ github.ref_type }}- | |
| ${{ github.event.pull_request.number || github.sha }} | |
| cancel-in-progress: true | |
| jobs: | |
| generate: | |
| name: generate-and-upload-manifests | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| SCHEMATIC_SERVICE_ACCOUNT_CREDS: ${{ secrets.SCHEMATIC_SERVICE_ACCOUNT_CREDS }} | |
| SYNAPSE_AUTH_TOKEN: ${{ secrets.SYNAPSE_TOKEN_DPE }} | |
| #SYNAPSE_UPLOAD_FOLDER_ID: syn25878249 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.10' | |
| cache: 'pip' | |
| - name: Install Poetry | |
| run: | | |
| curl -sSL https://install.python-poetry.org | python3 - | |
| export PATH="$HOME/.local/bin:$PATH" | |
| - name: Install dependencies | |
| run: | | |
| poetry install | |
| - name: Generate all manifests | |
| working-directory: processes | |
| run: poetry run ./generate_all_templates.sh | |
| - name: Create Pull Request | |
| uses: peter-evans/create-pull-request@v5 | |
| with: | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| commit-message: "GitHub Action: generate latest manifests" | |
| title: "Update manifests" | |
| body: | | |
| This PR updates the manifests based on the latest changes. | |
| Please review and merge if everything looks correct. | |
| branch: update-manifests | |
| base: main | |
| labels: | | |
| automated pr | |
| manifest update | |
| draft: true | |
| delete-branch: false | |
| #- name: Upload all manifests | |
| # working-directory: elite-data/manifest-templates | |
| # run: poetry run ../processes/upload_templates.sh |