Official v1.0.2 CRAN release.

enblacar · Oct 25, 2022 · 93f626c · 93f626c
1 parent 124303d
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diff --git a/CRAN-SUBMISSION b/CRAN-SUBMISSION
@@ -1,3 +1,3 @@
-Version: 1.0.1
-Date: 2022-10-16 20:03:42 UTC
-SHA: a0684f1c6c3cd779834884b8bbad499107a9ffce
+Version: 1.0.2
+Date: 2022-10-25 14:52:31 UTC
+SHA: 124303d0c15d789099cfd3875f069f59e750750a
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: SCpubr
 Type: Package
 Title: Generate Publication Ready Visualizations of Single Cell Transcriptomics Data
-Version: 1.0.1.9000
+Version: 1.0.2
 Authors@R: person("Enrique", "Blanco-Carmona", email = "[email protected]", role = c("cre", "aut"), comment = c(ORCID = "0000-0002-1208-1691"))
 Description: A system that provides a streamlined way of generating publication ready plots for known Single-Cell transcriptomics data in a “publication ready” format. This is, the goal is to automatically generate plots with the highest quality possible, that can be used right away or with minimal modifications for a research article.
 License: GPL-3
@@ -28,10 +28,8 @@ Suggests:
     ggrastr,
     ggrepel,
     ggridges,
-    ggsankey (>= 0.0.99999),
     ggsignif,
     graphics,
-    liana (>= 0.1.6),
     magrittr,
     Nebulosa,
     patchwork,
@@ -61,6 +59,3 @@ VignetteBuilder: knitr
 Config/testthat/edition: 3
 biocViews: 
     Software, SingleCell, Visualization
-Remotes: 
-    saezlab/liana,
-    davidsjoberg/ggsankey
diff --git a/NAMESPACE b/NAMESPACE
@@ -1,6 +1,5 @@
 # Generated by roxygen2: do not edit by hand
 
-export(do_AlluvialPlot)
 export(do_BarPlot)
 export(do_BeeSwarmPlot)
 export(do_BoxPlot)
@@ -15,14 +14,11 @@ export(do_EnrichmentHeatmap)
 export(do_FeaturePlot)
 export(do_GeyserPlot)
 export(do_GroupwiseDEPlot)
-export(do_LigandReceptorPlot)
 export(do_NebulosaPlot)
 export(do_PathwayActivityPlot)
 export(do_RidgePlot)
-export(do_SankeyPlot)
 export(do_TFActivityPlot)
 export(do_TermEnrichmentPlot)
 export(do_ViolinPlot)
 export(do_VolcanoPlot)
-export(save_Plot)
 export(state_dependencies)
diff --git a/NEWS.md b/NEWS.md
@@ -1,6 +1,4 @@
-# SCpubr v1.0.1.9000 (current in-development version)
-
-Take this a teaser of things to come in the next version.
+# SCpubr v1.0.2
 
 ## General changes
 

diff --git a/R/do_AlluvialPlot.R b/R/do_AlluvialPlot.R