Issue 793: Improve documentation for those specifying a non-parametric delay #1335
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| --- | |
| # Github Actions workflow to render EpiNow2 documents | |
| # yamllint disable rule:line-length | |
| name: Commands | |
| 'on': | |
| issue_comment: | |
| types: [created] | |
| jobs: | |
| document: | |
| if: contains(github.event.comment.body, '/document') | |
| name: document | |
| runs-on: macOS-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/pr-fetch@v2 | |
| with: | |
| repo-token: ${{ secrets.GITHUB_TOKEN }} | |
| - uses: r-lib/actions/setup-r@v2 | |
| - name: Install dependencies | |
| run: Rscript -e 'install.packages(c("remotes", "roxygen2"))' -e 'remotes::install_deps(dependencies = TRUE)' | |
| - name: Document | |
| run: Rscript -e 'roxygen2::roxygenise()' | |
| - name: commit | |
| run: | | |
| git config --local user.email "[email protected]" | |
| git config --local user.name "GitHub Actions" | |
| git add man/\* NAMESPACE | |
| git commit -m 'Document' | |
| - uses: r-lib/actions/pr-push@v2 | |
| with: | |
| repo-token: ${{ secrets.GITHUB_TOKEN }} | |
| style: | |
| if: contains(github.event.comment.body, '/style') | |
| name: style | |
| runs-on: macOS-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/pr-fetch@v2 | |
| with: | |
| repo-token: ${{ secrets.GITHUB_TOKEN }} | |
| - uses: r-lib/actions/setup-r@v2 | |
| - name: Install dependencies | |
| run: Rscript -e 'install.packages(c("styler", "roxygen2", "remotes"))' -e 'remotes::install_deps(dependencies = TRUE)' | |
| - name: Whitespace | |
| run: | | |
| find . -type f \( -name 'DESCRIPTION' -name "*.R" -o -name "*.stan" \) -exec sed -i '' -e 's/[ \t]*$//' {} \; | |
| - name: Style | |
| run: Rscript -e 'styler::style_pkg()' | |
| - name: Document | |
| run: Rscript -e 'roxygen2::roxygenise()' | |
| - name: commit | |
| run: | | |
| git config --local user.email "[email protected]" | |
| git config --local user.name "GitHub Actions" | |
| git add \*.R | |
| git add \*.stan | |
| git add DESCRIPTION | |
| git add man/\* NAMESPACE | |
| git commit -m 'Style' | |
| - uses: r-lib/actions/pr-push@v2 | |
| with: | |
| repo-token: ${{ secrets.GITHUB_TOKEN }} |