manually install up-to-date rstan in action #607
Workflow file for this run
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| # For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag. | |
| # https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - master | |
| - develop | |
| schedule: | |
| - cron: '5 4 * * 1' | |
| pull_request: | |
| branches: | |
| - main | |
| - master | |
| - develop | |
| workflow_dispatch: | |
| name: R-CMD-check | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| R-CMD-check: | |
| if: "! contains(github.event.head_commit.message, '[ci skip]')" | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: macOS-latest, r: 'release', rtools: ''} | |
| - {os: windows-latest, r: 'release', rtools: '42'} | |
| - {os: ubuntu-latest, r: 'release', rtools: ''} | |
| - {os: ubuntu-latest, r: 'oldrel-1', rtools: ''} | |
| - {os: ubuntu-latest, r: 'devel', rtools: ''} | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: yes | |
| NOT_CRAN: true | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Install cmdstan Linux system dependencies | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y libcurl4-openssl-dev || true | |
| sudo apt-get install -y openmpi-bin openmpi-common libopenmpi-dev || true | |
| sudo apt-get install -y libpng-dev || true | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| rtools-version: ${{ matrix.config.rtools }} | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::rcmdcheck | |
| needs: check | |
| - name: Manually install dev versions of StanHeaders and rstan | |
| run: | | |
| install.packages("devtools") | |
| devtools::install_github("stan-dev/rstan/StanHeaders@develop") | |
| devtools::install_github("stan-dev/rstan/rstan/rstan@develop") | |
| shell: Rscript {0} | |
| - uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| upload-snapshots: true |