Update documentation #78
Workflow file for this run
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name: Lint and test | |
on: [push, pull_request] | |
jobs: | |
build-linux: | |
runs-on: ubuntu-latest | |
strategy: | |
max-parallel: 5 | |
matrix: | |
python-version: ["3.10"] #, "3.9", "3.10"] | |
# Skip `pull_request` runs on local PRs for which `push` runs are already triggered | |
if: github.event_name == 'push' || github.event.pull_request.head.repo.full_name != github.repository | |
# Service containers to run with `container-job` | |
services: | |
# Label used to access the service container | |
redis: | |
# Docker Hub image | |
image: redis | |
# Set health checks to wait until redis has started | |
options: >- | |
--health-cmd "redis-cli ping" | |
--health-interval 10s | |
--health-timeout 5s | |
--health-retries 5 | |
ports: | |
# Maps port 6379 on service container to the host | |
- 6379:6379 | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v3 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install LDAP dependencies | |
run: sudo apt-get -y install libsasl2-dev libldap2-dev libssl-dev | |
- name: Set up Conda environment | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
micromamba-version: "latest" | |
environment-file: conda-environment.yml | |
cache-environment: true | |
post-cleanup: "all" | |
- name: Install MXCuBE | |
run: "${MAMBA_EXE} run --name mxcubeweb poetry install" | |
- name: Linting & Code Quality | |
run: "${MAMBA_EXE} run --name mxcubeweb poetry run pre-commit run --all-files" | |
- name: Test with pytest | |
run: "${MAMBA_EXE} run --name mxcubeweb poetry run pytest" |