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seqCAT version 1.0.0
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@fasterius fasterius released this 08 Nov 09:42
· 210 commits to master since this release
1.0.0
64da31a

This is the very first release of the seqCAT R package, and mirrors the 1.0.0 version available on Bioconductor. The original functionality include the following:

  • Creation of SNV profiles from annotated VCF files
  • Reading and exploring SNV profiles
  • Comparing and evaluating SNV profiles
  • Exploring both known variants and specific genomic regions of interest
  • Creation of both similarity heatmaps and impact distribution figures
  • Convenience functions for performing both one-to-many and many-to-many profile comparisons
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