update programming environment: spack support, cmake preset, gpu and external libs

[prudhomm]

• Have you checked to ensure there aren't other open Pull Requests for the same change?
• Have you added an explanation of what your changes do and why you'd like us to include them?
• Have you written new tests for your changes?
• Have you successfully run the Feel++ testsuite with your changes locally?
• Have you written Doxygen comments in your contribution ?

---

• closes add spack environment to the main CI #2284

• closes Integrate Warning Control Headers for Cleaner Code #2301

• update environment closes update cmake preset using jsonnet for systematic generation #2283

  • closes add support for spack #2016
  • closes update glog and gflags #2294
  • closes use glog/gflags from spack and update support #2299
  • closes use cpr from spack #2298
  • closes use cln from spack #2296
  • closes use fmi4cpp from spack #2297
  • closes add support for kokkos #2290
  • closes add support for gpu #2291
  • closes add support for ginac via spack #2317

[prudhomm]

here are the results of the testsuite 923 tests on the spack env feelpp-openmpi4:

94% tests passed, 52 tests failed out of 923

Label Time Summary:
cfpdes               =   7.09 sec*proc (2 tests)
heat                 = 107.27 sec*proc (5 tests)
testalg              =  42.91 sec*proc (26 tests)
testcore             =  78.00 sec*proc (62 tests)
testdiscr            = 1822.89 sec*proc (112 tests)
testevents           =   4.00 sec*proc (2 tests)
testfilters          =  90.46 sec*proc (20 tests)
testfit              =   8.24 sec*proc (4 tests)
testintegration      =  42.67 sec*proc (16 tests)
testinterpolation    = 372.26 sec*proc (25 tests)
testleaks            =  28.20 sec*proc (16 tests)
testls               =   5.05 sec*proc (2 tests)
testmaterial         =   0.71 sec*proc (2 tests)
testmath             =   0.68 sec*proc (2 tests)
testmesh             = 122.16 sec*proc (38 tests)
testmodels           =   4.28 sec*proc (2 tests)
testmor              = 113.20 sec*proc (25 tests)
testopt              =   4.86 sec*proc (3 tests)
testpde              =  15.76 sec*proc (6 tests)
testpoly             =  57.89 sec*proc (20 tests)
testpython           =   9.79 sec*proc (6 tests)
testts               =  12.64 sec*proc (7 tests)
testvf               = 152.90 sec*proc (44 tests)
testviewfactor       = 102.48 sec*proc (2 tests)

Total Test time (real) = 6111.75 sec

The following tests did not run:
        743 - feelpp_test_hdiv-np-1 (Skipped)
        842 - feelpp_test_bdf3-np-1 (Skipped)

The following tests FAILED:
        465 - feelpp_qs_python-alg (Failed)
        466 - feelpp_qs_python-mpi-alg (Failed)
        467 - feelpp_qs_python-core (Failed)
        468 - feelpp_qs_python-mpi-core (Failed)
        469 - feelpp_qs_python-discr (Failed)
        470 - feelpp_qs_python-mpi-discr (Failed)
        471 - feelpp_qs_python-exporter (Failed)
        472 - feelpp_qs_python-mpi-exporter (Failed)
        473 - feelpp_qs_python-integrate (Failed)
        474 - feelpp_qs_python-mpi-integrate (Failed)
        475 - feelpp_qs_python-measure (Failed)
        476 - feelpp_qs_python-mpi-measure (Failed)
        477 - feelpp_qs_python-mesh (Failed)
        478 - feelpp_qs_python-mpi-mesh (Failed)
        479 - feelpp_qs_python-meshmover (Failed)
        480 - feelpp_qs_python-mpi-meshmover (Failed)
        481 - feelpp_qs_python-operators (Failed)
        482 - feelpp_qs_python-mpi-operators (Failed)
        483 - feelpp_qs_python-remesh (Failed)
        484 - feelpp_qs_python-mpi-remesh (Failed)
        485 - feelpp_qs_python-remotedata (Failed)
        486 - feelpp_qs_python-mpi-remotedata (Failed)
        487 - feelpp_qs_python-timing (Failed)
        488 - feelpp_qs_python-mpi-timing (Failed)
        489 - feelpp_toolbox_python-tests-fluid (Failed)
        490 - feelpp_toolbox_python-tests-mpi-fluid (Failed)
        491 - feelpp_toolbox_python-tests-cfpdes (Failed)
        492 - feelpp_toolbox_python-tests-mpi-cfpdes (Failed)
        493 - feelpp_toolbox_python-tests-heat (Failed)
        494 - feelpp_toolbox_python-tests-mpi-heat (Failed)
        495 - feelpp_toolbox_python-tests-electric (Failed)
        496 - feelpp_toolbox_python-tests-mpi-electric (Failed)
        497 - feelpp_toolbox_python-tests-thermoelectric (Failed)
        498 - feelpp_toolbox_python-tests-mpi-thermoelectric (Failed)
        499 - feelpp_toolbox_python-tests-heatfluid (Failed)
        500 - feelpp_toolbox_python-tests-mpi-heatfluid (Failed)
        501 - feelpp_toolbox_python-tests-interpolation (Failed)
        502 - feelpp_toolbox_python-tests-mpi-interpolation (Failed)
        503 - feelpp_mor_python-tests-mor (Failed)
        504 - feelpp_mor_python-tests-mpi-mor (Failed)
        505 - feelpp_mor_python-tests-nirb (Failed)
        506 - feelpp_mor_python-tests-mpi-nirb (Failed)
        661 - feelpp_test_importergmsh-np-6 (Failed)
        662 - feelpp_test_importergmsh-np-1 (Failed)
        703 - feelpp_test_interpolation_RT-np-1 (Failed)
        704 - feelpp_test_interpolation_Nedelec-np-1 (Failed)
        705 - feelpp_test_interpolation_Nedelec3d-np-1 (Timeout)
        722 - feelpp_test_integration_relatedmesh-np-6 (Failed)
        744 - feelpp_test_hdiv_oneelt-np-1 (Failed)
        745 - feelpp_test_hdiv3D_oneelt-np-1 (Timeout)
        746 - feelpp_test_hcurl_oneelt-np-1 (Failed)
        752 - feelpp_test_hcurl3D_oneelt-np-1 (Timeout)
Errors while running CTest

the python failures should not be a problem and easily fixed

[prudhomm]

for the python tests, we actually need to do a make install and then set PYTHONPATH to the install python directory. Once done it is all good :

> cmake --build --preset <preset> -t install/fast
> export PYTHONPATH=<snip>/install/<preset>/lib/python3.11/site-packages/
> ctest  --preset <preset>  -R _python-

here are the results for preset feelpp-clang-cpp20-spack-cpu-release:

95% tests passed, 2 tests failed out of 42

Total Test time (real) = 596.18 sec

The following tests FAILED:
        505 - feelpp_mor_python-tests-nirb (Failed)
        506 - feelpp_mor_python-tests-mpi-nirb (Failed)
Errors while running CTest

the last 2 failures are due to missing tqdm python package in environment

[prudhomm]

@thomas-saigre py-tqdm is now installed in our environment for nirb

[prudhomm]

here is the state of the CI with spack:

https://github.com/feelpp/feelpp/actions/runs/12623421589/job/35172411071?pr=2285#step:5:2388

925 tests passed 🎆

The next steps are:

• fix Ubuntu and Debian builds
• add docker support
• improve cpack support