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This repository contains a subset of the FieldTrip code related to distributed computing
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fieldtrip/qsub
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This is the FieldTrip QSUB toolbox. It facilitates distributed computing on a Linux cluster without requiring the MATLAB parallel toolbox or distributed computing engines. It only requires a standard MATLAB installation on the cluster nodes. Alternatively, it can use the MATLAB compiler to run on clusters where MATLAB is not available or where the number of licenses is limited. Using the FieldTrip QSUB toolbox requires that you have MATLAB on a computer from which you can directly (from the Linux command line) submit jobs, and a shared file system between the submit host and the compute nodes. The goal of this toolbox is to provide you with an easy MATLAB interface to distribute your jobs that is compatible with the MATLAB batch, feval and cellfun functions. It offers a simple MATLAB interface to distribute your jobs and you do not have to go to the Linux command-line to use the qsub command from there. The toolbox supports Linux clusters with Torque and other PBS versions, Sun Grid Engine (SGE), Oracle Grid Engine and with SLURM as the batch queueing system. This toolbox has been developed as part of the FieldTrip toolbox, but can be used separately. See http://www.fieldtriptoolbox.org for general details on the FieldTrip project, http://www.fieldtriptoolbox.org/development/qsub for specific details on the qsub toolbox or see http://www.fieldtriptoolbox.org/faq. ------------------------------------------------------------------------------- Copyright (C) 2011-2019, Robert Oostenveld This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program. If not, see <http://www.gnu.org/licenses/ -------------------------------------------------------------------------------
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This repository contains a subset of the FieldTrip code related to distributed computing