Rm typo in action #2
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| name: document-and-deploy | |
| on: | |
| push: | |
| pull_request: | |
| release: | |
| jobs: | |
| document-and-deploy: | |
| # Skip deploy for automated (e.g., documentation) and [no-deploy] commits | |
| if: "!contains(github.event.head_commit.message, '[automated]') && !contains(github.event.head_commit.message, '[no-deploy]')" | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Set up R version | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: "oldrel" # As shinyapps.io needs some time to catch up after releases | |
| use-public-rspm: true | |
| - name: Set up R Dependencies | |
| uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: devtools, roxygen2, remotes, rsconnect | |
| - name: Create documentation | |
| run: | | |
| R -e " | |
| file.remove('NAMESPACE'); | |
| descr <- readLines('DESCRIPTION'); | |
| descr <- stringr::str_replace(descr, '^Date.*$', paste('Date:', Sys.Date())); | |
| writeLines(descr, 'DESCRIPTION'); | |
| roxygen2::roxygenise(); | |
| try(devtools::build_manual()) | |
| " | |
| - name: commit | |
| run: | | |
| git config --local user.email "[email protected]" | |
| git config --local user.name "GitHub Actions" | |
| git add -f man/\* NAMESPACE | |
| git commit -m 'Documentation' || echo "No changes to commit" | |
| git push origin || echo "No changes to commit" | |
| - name: Deploy to Shiny | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| R -e " | |
| remotes::install_local(force = TRUE); | |
| rsconnect::setAccountInfo(name='forrt-replications', token=${{secrets.SHINYAPPS_TOKEN}}, secret=${{secrets.SHINYAPPS_SECRET}}); | |
| rsconnect::deployApp(appName = 'fred_annotator', appDir = './inst/fred_annotator', forceUpdate = TRUE)"; | |
| rsconnect::deployApp(appName = 'fred_explorer', appDir = './inst/fred_explorer', forceUpdate = TRUE)"; | |
| " | |
| - name: Deploy release version conditionally | |
| if: github.event_name == 'release' && github.event.release.tag_name != '*test*' | |
| run: | | |
| R -e " | |
| appDir <- system.file('fred_explorer', package = 'FReD'); | |
| rsconnect::deployApp(appName = 'fred_explorer_release', appDir = './inst/fred_explorer', forceUpdate = TRUE); | |
| appDir <- system.file('fred_annotator', package = 'FReD'); | |
| rsconnect::deployApp(appName = 'fred_annotator_release', appDir = './inst/fred_annotator', forceUpdate = TRUE); | |
| " | |
| - name: Create pkgdown | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| R -e " | |
| if (!require(FReD) remotes::install_local(force = TRUE); | |
| options(pkgdown.internet = TRUE) | |
| pkgdown::build_site_github_pages(new_process = FALSE) | |
| " | |
| - name: Deploy to GitHub pages 🚀 | |
| if: ${{ github.ref_name }} == 'main' | |
| uses: JamesIves/github-pages-deploy-action@v4 | |
| with: | |
| clean: true | |
| branch: gh-pages | |
| folder: docs |