Francesca Cairoli, Ginevra Carbone, Luca Bortolussi.
The code containing the experiments and the results presented at the CMSB 21 conference. The folder is organized as follows:
- Stochpy/psc_models folder contains the CRN model expressed, as a set of reactions, in the Stochpy format.
- Dataset_Generation folder contains the scripts to generate the datasets through SSA simulation (based on Stochpy library):
- Trajectory_Abstraction folder contains the implementation of the c-WCGAN-GP with either fixed parameters (gp_model_abstraction.py) or with an arbitrary number of varying parameters (param_gp_model_abstraction.py).
The command to repeate the experiments prensented in the paper are specified in the file commands_for_experiments.txt.
The datasets used are shared at the following link: https://mega.nz/folder/1WZGmJSL#J9Wjzi2zIxesrEAEqJUJqw